Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1606g00003 ATGGGCATGCAATTAGCATTATTGTGTCTGGTGATACTCAAGATAACTTCAGCATTTGCAACCACACTGAACGAAGCCTATGGTGGTGATACTGGCTGTCCATTAGGGACTGACATATACCAATACACTTGCCCCGAAGCAGAGGCCATAATCTTCTCTTGGGTGGAACAGGCAGTCTCTGAAGACTCAAGAATGGCAGCATCACTGCTCAGGCTACATTTTCACGATTGCTTTGTCAATGGTTGTGATGCTTCGGTCTTGCTGGATGACACACAGGACTTTGTTGGTGAGAAGACTGCAGCTCCTAACTTGAATTCACTCAGAGGATTTGAAGTAATCGACCAAATCAAATCTGAACTAGAACTAGTATGTCCACAAACTGTCTCTTGTGCCGACATACTGGCTACTGTTGCTCGAGATTCAGTTGTTCTGTCAGGAGGCCCAATTTGGGAGGTACAGATGGGAAGGAAAGACGGTATGACTGCAAGCAAGCAAGCAGCAAATAATAACATCCCAGCCCCAAACTCAACTGTCGATGTGCTCGTAACTAAGTTCGAGAATGTAGGCCTTACACTAAAAGACATGGTTGCCCTCTCAGGTGCGCACACAATAGGAAAAGCCCGCTGCACAACATTCAGCTCTCGTTTACAGAGTAGCAGCATCTCGAATAGTCCATATGATAATATTGATTTCATTGCATCATTGCAACAGTTGTGCTCAGGGTCGAATAATAACAACAGAGTTGCAAATCTTGATCTGGACACACCAGCCACGTTTGACAACCAATACTACGTAAATCTTCTTTCTGGGGAGGGATTGCTTCCATCCGACCAGACGCTAGTGAGTGGGAATGATCAGACACGACAGATTGTCCAAACCTACGTGGAAGACCCATTCACTTTCTTCGAGAACTTCAAGTATTCAATGTTAAAAATGGGAAACTTAGGATCACTTACTCCAGCTAACGGCGAGATTCGTAGAGACTGCCGAACTATTAACAAATTTTAG 1008 0.4454 MGMQLALLCLVILKITSAFATTLNEAYGGDTGCPLGTDIYQYTCPEAEAIIFSWVEQAVSEDSRMAASLLRLHFHDCFVNGCDASVLLDDTQDFVGEKTAAPNLNSLRGFEVIDQIKSELELVCPQTVSCADILATVARDSVVLSGGPIWEVQMGRKDGMTASKQAANNNIPAPNSTVDVLVTKFENVGLTLKDMVALSGAHTIGKARCTTFSSRLQSSSISNSPYDNIDFIASLQQLCSGSNNNNRVANLDLDTPATFDNQYYVNLLSGEGLLPSDQTLVSGNDQTRQIVQTYVEDPFTFFENFKYSMLKMGNLGSLTPANGEIRRDCRTINKF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1606g00003 335 Gene3D Peroxidase, domain 2 172 313 - -
Gabi1606g00003 335 Gene3D - 40 333 - -
Gabi1606g00003 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Gabi1606g00003 335 Pfam Peroxidase 55 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 FunFam Peroxidase 172 312 - -
Gabi1606g00003 335 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Gabi1606g00003 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 FunFam Peroxidase 38 187 - -
Gabi1606g00003 335 PANTHER PEROXIDASE 72-RELATED 35 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 CDD secretory_peroxidase 35 330 IPR033905 GO:0004601|GO:0042744
Gabi1606g00003 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 SUPERFAMILY Heme-dependent peroxidases 35 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1606g00003 335 ProSiteProfiles Plant heme peroxidase family profile. 34 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1606g00003 Gabi-Chr1606 60835 62169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1606g00003 29 333 Peroxidase AT4G16270 62.540 2.52e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1606g00003 K00430 - gmx:100787637 556.214