Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1606g00001 ATGGCATCATCATCATCATCATCCTCGTCTCTGATCTCAAACCCAGTAACGAACACGGAACGGTCACGTGACTCAAAGAGGAGGAGGAAGAAGAAAGCTCAGCTGAAGCATCATCATCATCAGCAAGAAGATCAGATTCAGAGCCACCCCAAATGGAAATCCCAAGCGCAGCAACAAATCTATTCCTCCAAACTGCGCCAAGCCTTAGCCAGAGTCAACGTCGGCTCATCCAGCTCGGCGCCTCGCCGAGTCCGCGAAGCCGCCGACAGAGTACTCGCCGTCACGGCCAAGGGGAGGACTCGATGGAGCCGAGCCATCCTGACGAACCGGCTCAAGCTGAAGTTCATGAAGCACAAGAGGCAGAGGGTGAAGGTGCCAACCCGGTCCAAGAAGCCCCGGGTCAGCGTTTTCCGGTTGAAGGGGAAAAGTGTACCGTTTGTGCAGAGGAAAGTGAGGTTCCTTGGACGGTTGGTTCCCGGTTGCCAAAAAGAACCGTTACCGGTGATCCTGGAAGAAGCCATTGATTACATACCTGCACTTGAGATGCAGGTACGAGCCATGAGCACTCTCTTCAACCTACTATCTGCTTCGGCTTCGGCTTCGGCTTCTGCGCCTCCTAGCTGA 624 0.5433 MASSSSSSSSLISNPVTNTERSRDSKRRRKKKAQLKHHHHQQEDQIQSHPKWKSQAQQQIYSSKLRQALARVNVGSSSSAPRRVREAADRVLAVTAKGRTRWSRAILTNRLKLKFMKHKRQRVKVPTRSKKPRVSVFRLKGKSVPFVQRKVRFLGRLVPGCQKEPLPVILEEAIDYIPALEMQVRAMSTLFNLLSASASASASAPPS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1606g00001 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 198 IPR036638 GO:0046983
Gabi1606g00001 207 MobiDBLite consensus disorder prediction 1 60 - -
Gabi1606g00001 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 54 194 IPR044660 GO:0006355
Gabi1606g00001 207 CDD bHLH_AtIBH1_like 138 190 IPR044549 GO:0006355
Gabi1606g00001 207 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1606g00001 Gabi-Chr1606 10463 11931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1606g00001 49 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.491 1.14e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1606g00001 - - gmx:100803765 264.618