Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1594g00015 ATGGCCAATAAAAGCTCGTCAAATGGGTCGTCTTCATCTGATTTCGATAAGGCTTCGGCTCCCTCGCCATCTTCTCCGTCGTCTGATGAGTCAGATTCTCCACCACCTTCCCCGTCTCTGTCGTCTCAGTTGTCCAATGACTCAGATTCTCCACCGGCTCCTCCTCCGCAGTCTCCGCCGCCATCTCCGTCTCATTCTCCCCCACCTTCCCCTTCTACGCCGCCACCGCAGTCTCCCTCCCCACCTCCGCCGTCTCCCTCACCGCCTCCACCTCTGTCGCTTTCTCCACCTCCGTCGCTTTCTCCTCCGCCGCCTCCTTCTAGTCCACCGCCATCAAAAGCTCCTCCTCACTCTCCATCGGCACCACCCCCCGAACCGCCGCCACCTTCTCCACCACCACCATCTCAACAGTCACCTCCATCACAACCTCATGCCCCTCCTCCACCTTACATGTCTCCTCCGCCCCCACCAACTGGTTCAGGGCCAAACCATCCTCCGCCGCCGCTATCACCACCCACTCCCGCGAGCTCCCATCCAAAACCAAACGCTCCTTCTTCTAATAGCCACTCCCCGTCCAAGTCACCAACCTCCAGTGATAAGACAGGAGAATACGTTGGTTTTTCTCTCGCCGCTGTTTTCGTTCTTGCCTTAGTTGCTCTATTACTTTTTTTCATATTGAGGAGGAAGAAAAAACGAGGGAATGTCTATGATGTGCATTACTATGTAGAGGGACCTGGTTTTGTGAATGGTGCACAAGATGGGTTTTATAGTTCACAGCCCACAAACAATTATGGAAATAGGAACCTTGCAGGTGGCAATGGCATGCATCATTTAAGAACTCCTTCAGACCAGCATTTAAGTGCTGGTCAGATAGTATTTAGCTATGACAAGGTTGTGGAAATTACTAACGGGTTTTCTAGTGAAAACGTAATTGGGGAAGGGGGATTTGGGTGTGTTTACAAGGCTTCGATGCCAGATGGTAGAGTTGGAGCGGTTAAGCTTCTGAAAGCTGGTAGTGGACAGGGAGAAAGGGAGTTCAGGGCTGAGGTTGATATTATCAGCCGTGTCCATCATCGACATTTGGTATCTTTAATTGGTTATTGCATATCCGACCACCAAAGAGTGCTTATCTATGAGTACGTTCCTAATGGGAACCTCGATCAGCACTTGCATGATATGGTAGTTTTGGATTGGCCTAAGAGGTTGAAGATAGCAATTGGCGCTGCAAGGGGCCTGGCATATCTGCATGATGGCTGCAACCCAAGGATTATTCACAGAGATATTAAGTCGGCTAACATACTTCTGGATGATAATTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTAACCGATGATGCTAATACTCATGTATCAACAAGGGTGATGGGGACCTTCGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTTTCATTTGGAGTTGTCCTCCTTGAGCTTGTAACTGGAAGGAAACCTGTTGATCCAACGCAGCCCGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAATTGAGACAGGTGACTTTGGTGAACTAGTAGACCCAAGGCTTGAACGGAACTACGTTGACAGTGAAATGTTCAGAATGATAGAGGCAGCTGCAGCATGTGTTCGACATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTAGACAGCGGAGATCAAATATATGATCTAACTAATGGGGTGAAATATGGTCAGAGCACTGTTTATGATTCTGGCCAGTATAATGAAGACATCATGAGATTCAGAAGGATGGCTAATGGCAGCTTTAGTGATTCTGATTTTCATATATACAGTACAGAATACAGTTCAAGAGAACAGATATCTGGAACCAAACATGCAAGGATGCCTTATAGTACAAGTGGTGGTGATTCAGAATTTAGATCTTTCCACAGCCAAATGAACATTGCCGAGCACAGATCTTGA 2007 0.4828 MANKSSSNGSSSSDFDKASAPSPSSPSSDESDSPPPSPSLSSQLSNDSDSPPAPPPQSPPPSPSHSPPPSPSTPPPQSPSPPPPSPSPPPPLSLSPPPSLSPPPPPSSPPPSKAPPHSPSAPPPEPPPPSPPPPSQQSPPSQPHAPPPPYMSPPPPPTGSGPNHPPPPLSPPTPASSHPKPNAPSSNSHSPSKSPTSSDKTGEYVGFSLAAVFVLALVALLLFFILRRKKKRGNVYDVHYYVEGPGFVNGAQDGFYSSQPTNNYGNRNLAGGNGMHHLRTPSDQHLSAGQIVFSYDKVVEITNGFSSENVIGEGGFGCVYKASMPDGRVGAVKLLKAGSGQGEREFRAEVDIISRVHHRHLVSLIGYCISDHQRVLIYEYVPNGNLDQHLHDMVVLDWPKRLKIAIGAARGLAYLHDGCNPRIIHRDIKSANILLDDNYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPVGDESLVEWARPLLLRAIETGDFGELVDPRLERNYVDSEMFRMIEAAAACVRHSAPKRPRMVQVVRALDSGDQIYDLTNGVKYGQSTVYDSGQYNEDIMRFRRMANGSFSDSDFHIYSTEYSSREQISGTKHARMPYSTSGGDSEFRSFHSQMNIAEHRS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 633 656 - -
Gabi1594g00015 668 Gene3D Phosphorylase Kinase; domain 1 261 380 - -
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 49 179 - -
Gabi1594g00015 668 ProSiteProfiles Protein kinase domain profile. 305 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 180 200 - -
Gabi1594g00015 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 34 48 - -
Gabi1594g00015 668 FunFam Proline-rich receptor-like protein kinase PERK8 277 380 - -
Gabi1594g00015 668 Gene3D Transferase(Phosphotransferase) domain 1 381 590 - -
Gabi1594g00015 668 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 212 623 IPR047117 -
Gabi1594g00015 668 PRINTS Proline rich extensin signature 66 83 - -
Gabi1594g00015 668 PRINTS Proline rich extensin signature 84 109 - -
Gabi1594g00015 668 PRINTS Proline rich extensin signature 14 35 - -
Gabi1594g00015 668 PRINTS Proline rich extensin signature 48 64 - -
Gabi1594g00015 668 SUPERFAMILY Protein kinase-like (PK-like) 283 576 IPR011009 -
Gabi1594g00015 668 CDD STKc_IRAK 311 577 - -
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 1 200 - -
Gabi1594g00015 668 MobiDBLite consensus disorder prediction 1 27 - -
Gabi1594g00015 668 Pfam Protein tyrosine and serine/threonine kinase 308 575 IPR001245 GO:0004672|GO:0006468
Gabi1594g00015 668 SMART serkin_6 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1594g00015 668 FunFam proline-rich receptor-like protein kinase PERK8 381 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1594g00015 Gabi-Chr1594 141896 146317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1594g00015 165 646 Trihelix Transcription Factor Family AT1G70460 56.944 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gabi1594g00015 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1594g00015 - - gmx:100807815 682.559