Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1582g00006 ATGAAGAAATTCTCTCCTTATGCTTGTTTACTCAATTTGAGTCTCTTGGCTTTTTTTCCTTATAGCAAAGCCAGTCAGGCTGATAAACTTGATGAGTTGATTCTGTCTAGGAGCTCACAGAATCCTCCTATGACACTTTCTTGGGCAGAGGAAGATGCAATGAAAACGCATTATTCTGCCAATGTTGCACCTCAAGAGGGTTTAAGGCAAGCTGACAAGATTGTTGCATTGCCTGGCCAGCCCTATGGGGTGAATTTTGACCAATATGCAGGATACGTAACAGTTGATCCAGTGGCCGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACTCTTCAACTAAACCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCACTGGGGTATGGGGCCTTCGAGGAGCTGGGACCCTTCAGAGTCAATTCTGATGGCAAAACACTATTTAATAACAAATATGCTTGGAATGAAGTTGCAAATGTGCTCTTCTTGGAATCCCCTGCTGGAGTTGGCTTTTCCTACTCAAACACTACTTCTGACTATGACCGTACAGGAGATAAGTCTACTGCCAAGGATGCCTATGTCTTCCTCATAAACTGGTTAGAGAGGTTTCCAGAATACAAGAGCAGGGATTTTTACATAACCGGAGAGAGCTATGGTGGTCATTATGTGCCTCAGCTTGCATACACCATTTTGCTAAGCAATAAATTGAATTACCAAACAATTGTTAATCTCAAAGGCATTGCTATAGGGAATGCCTGGATTGATGATGCTACAAGTTTAAAGGGAATATTTGATTACTTATGGGCTCACGCTTTGAACTCAGATGAAACCCATGAGGTGATTGAGAAGTATTGCGACTTCTCTTCTGAAAATCTTTCAGCAATATGCCTTAATGCAACAACAAGGGCCATAACTGAGAAAGGGAGCATAGATTTCTATAACATCTATGCTCCCCTGTGTCATGACACTTCTTTGAAAAATGGATCAACTGGTTCTGTATATGATTTTGACCCATGTTCTGATTACTACGGGACAGCCTATCTAAATAGGCCAGAGGTCCAATTAGCTCTTCATGCAAAACCCACAAATTGGAGCCATTGCAGTGGTTTTAACTGGACTGACAGCCCCACTACCATCCTACCCATCATCGAGTATCTCATTGCCAATGATATTAAATTGTGGATATACAGTGGTGATATAGATGCAAGGGTGCCTGTCACATCTTCTAGATATTCAATCAACACCCTCAAGCTCCCTATCCAGGTTGCATGGCATCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGAAATACAAAGGAGTGACATTTGTGACAGTAAGAGGAGCAGGACATACGGTTCCAAGCTGGCAACCAGCTCGGGCTCTGATCTTGATCTTATCATTCCTCTATGAAAGCCTGCCTCCTGCTTCACCGTGGATAGGGTTCTAA 1470 0.4259 MKKFSPYACLLNLSLLAFFPYSKASQADKLDELILSRSSQNPPMTLSWAEEDAMKTHYSANVAPQEGLRQADKIVALPGQPYGVNFDQYAGYVTVDPVAGRALFYYFVESPYNSSTKPLVLWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLFNNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDRTGDKSTAKDAYVFLINWLERFPEYKSRDFYITGESYGGHYVPQLAYTILLSNKLNYQTIVNLKGIAIGNAWIDDATSLKGIFDYLWAHALNSDETHEVIEKYCDFSSENLSAICLNATTRAITEKGSIDFYNIYAPLCHDTSLKNGSTGSVYDFDPCSDYYGTAYLNRPEVQLALHAKPTNWSHCSGFNWTDSPTTILPIIEYLIANDIKLWIYSGDIDARVPVTSSRYSINTLKLPIQVAWHPWYSGNEVGGYVVKYKGVTFVTVRGAGHTVPSWQPARALILILSFLYESLPPASPWIGF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1582g00006 489 FunFam Carboxypeptidase 384 478 - -
Gabi1582g00006 489 Gene3D - 344 375 - -
Gabi1582g00006 489 Pfam Serine carboxypeptidase 78 476 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Gabi1582g00006 489 Gene3D - 384 477 - -
Gabi1582g00006 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 SUPERFAMILY alpha/beta-Hydrolases 75 477 IPR029058 -
Gabi1582g00006 489 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Gabi1582g00006 489 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Gabi1582g00006 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 465 IPR001563 GO:0004185|GO:0006508
Gabi1582g00006 489 FunFam Carboxypeptidase 68 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1582g00006 Gabi-Chr1582 118220 121701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1582g00006 341 476 Calmodulin-binding Proteins AT2G22960 29.371 1.59e-11 61.6