Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1581g00013 ATGGCCACCCAAATGCAAGATCCGCCTTCAAACCCTATCCCTAATCCCAATGCCATGGCGACTACGTCGCCGTTTATCCGCGGTGGTGGGAACGGTGGTTCTGACAATCCGGTCTTCGGTTCCGGTTCCGGTTCCGGCGCCGGGGAGTCCCATTCTCACCATCGAAGGGCACAGTCGGAGGCCAGTTACCGGCTGCCGGATGACATTATGGACCTATCTCCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCCTGGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTTGAGAAGCTCGGAGCAGTCGGAGGAGGGACGAACGGATCGGGTCGCGGCGGAAACGGATCGGATCAGAGCGGTTACGGTAACGGCGCCGGCACGAGCGGTCAGAACGACGGAGAGAAGAGCTCGAGCGCCACCATGGCGAGGTCGAGGCACAGGCACAGTAGCTCCGTCGACGGTTCAACGTCGACGAGCATGTTTGGAGAGATCATGGAAGCCAAAAAAGCCATGCCTCCCGATAAGCTCGCTGAGCTATGGTCGATTGATCCAAAGCGTGCCAAGAGAATCCTCGCAAATAGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTCTCTGCCCAACTGACACTGTACCAGAGGGACACAACTGGTCTGAATACAGAAAATACTGAGCTTAAGCTCCGTCTCCAAGCCATGGAGCAACAGGCACAGCTTCGCGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGGGACATAATGAACCACTCCGAGTCTTTTAATCTGGGAATGCACCAGATGCCATTTGCAGGGTCAAATTTCTTTCCAATCCCACCACATTCAGGTCCTTCTGGTCACCAAAACATACAGTTGCCTCCATTTAGTCACTCCCCATCTAGCATGCCAACTCATCAGCTGCAACAAACAAATACTCTCCAAATGTCAGATATATTGCAGAATGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACCCTCGTGAAGTCTGAAGGTCCCTCAATATCTGCTAGTGAGAGCAGCACCACATTTTGA 1173 0.5286 MATQMQDPPSNPIPNPNAMATTSPFIRGGGNGGSDNPVFGSGSGSGAGESHSHHRRAQSEASYRLPDDIMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGAVGGGTNGSGRGGNGSDQSGYGNGAGTSGQNDGEKSSSATMARSRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLNTENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGDIMNHSESFNLGMHQMPFAGSNFFPIPPHSGPSGHQNIQLPPFSHSPSSMPTHQLQQTNTLQMSDILQNDQLGRLQGLDISSKGSTLVKSEGPSISASESSTTF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 318 341 - -
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 1 86 - -
Gabi1581g00013 390 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 253 IPR004827 GO:0003700|GO:0006355
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 312 341 - -
Gabi1581g00013 390 FunFam probable transcription factor PosF21 191 244 - -
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 370 390 - -
Gabi1581g00013 390 CDD bZIP_plant_RF2 193 242 IPR044759 GO:0003700|GO:0006355
Gabi1581g00013 390 Pfam bZIP transcription factor 192 249 IPR004827 GO:0003700|GO:0006355
Gabi1581g00013 390 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 108 165 - -
Gabi1581g00013 390 Coils Coil 243 263 - -
Gabi1581g00013 390 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 367 - -
Gabi1581g00013 390 Gene3D - 191 243 - -
Gabi1581g00013 390 Coils Coil 208 235 - -
Gabi1581g00013 390 SUPERFAMILY Leucine zipper domain 192 243 IPR046347 GO:0003700|GO:0006355
Gabi1581g00013 390 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1581g00013 Gabi-Chr1581 203954 207170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1581g00013 5 390 bZIP Transcription Factor Family AT2G40620 47.805 4.74e-95 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1581g00013 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1581g00013 - - gmx:100775607 587.03