Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi157g00004 ATGGCTTTTCTAAGCCCCTACTTGTCAGCTGTTTTCTGCTTTCTTCTCATAAACTTTTTAGTACAAAAAACAGGAAAGAAACCCAAGAAAAGTGTCTCAACTTATAACATACCCCCAGGGCCTAGAAAGCTACCTATTATTGGAAATATACACAATTTGGTAGGCTCACAACCCCATCGAAAATTAAGAGCTTTGGCCATAAAATATGGACCCTTGATGCATCTTCAACTTGGTGAGGTTTCTACTACTGTCATTTCATCACCCAAGTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATATTGTCTTATAATTCCACAAATATAGTTTTTGCTCCTTATGGTAATTATTGGAGACAGCTAAGAAAAATTTGCACGTTGGAGCTCTTAAGCCTAAAACGTGTGAACTCATTCCAGCCAATTAGAGAAGAAGAGCTCTCCAATCTTGTCAAAAGGATTGCTTCAGAGAAAGGAAAGCCCGTCAACCTCACTCAAGCAGTACTTTCTTCAATATATACAATCGCTTCAAGGGCTGCATTTGGCAAGAAATTCAAAGACCAAGAAAAGTTTATATCAGTGACAAAAGAATCAGCAAAGGTTGCGGGAGGTTTTGACATTGGAAATCTGTTTCCTTCTATTGCATGGCCTCAAATTATCAGTGGTTTGAGGCCTAAGCTTGAGAGGTTGCATCGACAAGCTGATCAGATAATGGAAAACATCATCAATGAGCATAAAGAGGCAAAATCAAACGCCAAAGGTGACCAAGGTGAAGCAGATGAAGATCTAGTAGATGTTCTCATGAAATATGAGGATGGTAGCAACCAGGATATTTTCTTAACCAAAAACAATATCAAGGCCATAATCCAGGACATATTTGGTGGTGGAGGTGAGACATCAGCAACAACCATAGATTGGGCAATGGTAGAAATGCTAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAAGTGAGAGAGGCATTCAATAAGAAAGGAAGGGTTGAAGAAAATTGCATCAATGAACTCAAATATTTGAAATCAATTGTGAAAGAGACACTGAGATTACACCCTCCAGGTGTTTTGCTTCCAAGAGAATGTGGTCAATCATGTGAGATAAATGGGTATTACATACCAGCCAAAAGTAAGGTCATAGTGAATCTTTGGGCAATTGGAAGAGATCCAAACTACTGGACTGAACCAGAGAGATTTTATCCAGAGAGATTCATTGATAGCACTATTGATTACAAAGGGAATAATTTTGAGTTCATTCCCTTTGGTGCTGGGAGAAGAATATGCCCAGGCATCACATTTGGTTTGAGAAGTGTTGAGCTGGCCCTTGCAATGTTGCTGTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAATGTGAAGAATTGGACATGACGGAGGACTTTGGATTTACAGTAAGAAGAAAAGATGATCTATTATTGATTCCTTTTGCTTATGATCCTTTGCCTGTCACAAGAGCTTCACAAGAAGAAACTTAA 1545 0.3903 MAFLSPYLSAVFCFLLINFLVQKTGKKPKKSVSTYNIPPGPRKLPIIGNIHNLVGSQPHRKLRALAIKYGPLMHLQLGEVSTTVISSPKCAREVMKTHDINFATRPQILATEILSYNSTNIVFAPYGNYWRQLRKICTLELLSLKRVNSFQPIREEELSNLVKRIASEKGKPVNLTQAVLSSIYTIASRAAFGKKFKDQEKFISVTKESAKVAGGFDIGNLFPSIAWPQIISGLRPKLERLHRQADQIMENIINEHKEAKSNAKGDQGEADEDLVDVLMKYEDGSNQDIFLTKNNIKAIIQDIFGGGGETSATTIDWAMVEMLRDPRIMKKAQAEVREAFNKKGRVEENCINELKYLKSIVKETLRLHPPGVLLPRECGQSCEINGYYIPAKSKVIVNLWAIGRDPNYWTEPERFYPERFIDSTIDYKGNNFEFIPFGAGRRICPGITFGLRSVELALAMLLYHFDWKLPNGMKCEELDMTEDFGFTVRRKDDLLLIPFAYDPLPVTRASQEET 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi157g00004 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Gabi157g00004 514 FunFam Cytochrome P450 71D8 30 498 - -
Gabi157g00004 514 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 CDD CYP71-like 68 494 - -
Gabi157g00004 514 Coils Coil 238 262 - -
Gabi157g00004 514 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00004 514 PANTHER OS08G0105600 PROTEIN 61 502 - -
Gabi157g00004 514 Coils Coil 329 349 - -
Gabi157g00004 514 Gene3D Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi157g00004 Gabi-Chr157 115457 117164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi157g00004 11 498 Cytochrome P450 AT3G26310 42.315 3.34e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi157g00004 - - gmx:100778572 798.119