LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi157g00002	ATGGAGCTACATCTCCAGAATATTCCCTCACCTGCGATGTTGTCCTTCTTTCTCTTCCTGTTCATGGTGTTTAGCATAGTTTGGAGATCAAAAACCAAGTCTTCAAACTCCAAGTTACCACCAGGGCCCCCAAAACTGCCACTTATTGGGAACATGCACAAGCTTGGTAAAATGCCTCATCAAGGCCTAACAAAATTAGCAAAGAAATATGGGCCTCTGATGCATATGAAACTTGGTGGTCTTTCCACCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTTATGAAGACACATGATATCATCTTTGCAAATAGGCCTCATGTTCTTGCAGCAGATGTTATCTCTTATGGTTCAAAGGGTATGAGCTTTTCCCCTTACGGAAGTTACTGGAGGCAGATGAGAAAGATTTGCACGTTTGAGCTACTAACACCAAAGCGTGTTGAATCATTTCAATCAATCAGGGAAGAGGAGGCATCAAATCTTATCAAACAGATATGTTTGAGTGAAGGGTCATCTATCAATCTTAGTAAGACGATTAGTTCCTTCTCCTATGGCTTAACATCACGAGTAGCCTTTGGAGGAAAATCCGAAGACCAAGAAGCATTCATAACTGTTATGAAGGATGTCTTAAAATTAGTTGCTGGTTTCTCTATAGCTGACTTGTATCCTTCAATTGAAGTGCTTCAAGTTTTGACAGGAATAAGGTCCAAAGCTGAGAAACTCCATCAAGAAATAGATAGAATCCTTGAGAAAATTGTCAGAGATCACAGACACACGAGTTCAGAAACAAAGGAAAACAATGAAAAAGTAGGTGAAGATCTAGTTGATGTCATGCTGAAGCTTCAGAAGCAGAACAACCTTGATCATCCTCTATCCGACAGCGTTATCAAAGCAACACTTTTGGATATCTTCAGTGCTGGAAGCGGTACTTCAGCAAAAACCATAGAGTGGGCAATGTCAGAACTTGTCAAAAATCCAAGGGTGATGGAAAGAGCACAAGTTGAAATAAGAAGGGTCTTTGATGGTAAAGGGCATGTAGATGAAGCTAACATTCATGAACTGAAATACTTAAAGTCAGTTATCAAAGAAACCTTGCGTCTACATCCTCCTGTTCCATTATTACTACCAAGGGAATGCAGTGAGAGATGTGAAATTAATGGTTATGAGATACCAGCTAAAAGTAAGGTTATTGTTAATGCTTGGGCAATTGGGAGGGATCCAAACTACTGGATTGAAGCTGAGAAGTTTTATCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGTAGATTTTCAGTTTATCCCATTTGGTGTTGGAAGGAGGATGTGTCCTGGCATTACATTTGGCATTGTTAATGTTGAAATCAAACTAGCAAATTTGCTTTTCCATTTTGATTGGAAGATGCCCAATGGGAATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGTCTGTAAGAAGAAAACATGATTTGTACTTGATTCCTTGTATGTATCACTCATCTACTAATTAA	1527	0.3942	MELHLQNIPSPAMLSFFLFLFMVFSIVWRSKTKSSNSKLPPGPPKLPLIGNMHKLGKMPHQGLTKLAKKYGPLMHMKLGGLSTIVVSSPEMAKEVMKTHDIIFANRPHVLAADVISYGSKGMSFSPYGSYWRQMRKICTFELLTPKRVESFQSIREEEASNLIKQICLSEGSSINLSKTISSFSYGLTSRVAFGGKSEDQEAFITVMKDVLKLVAGFSIADLYPSIEVLQVLTGIRSKAEKLHQEIDRILEKIVRDHRHTSSETKENNEKVGEDLVDVMLKLQKQNNLDHPLSDSVIKATLLDIFSAGSGTSAKTIEWAMSELVKNPRVMERAQVEIRRVFDGKGHVDEANIHELKYLKSVIKETLRLHPPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWIEAEKFYPERFLDSSVDYKGVDFQFIPFGVGRRMCPGITFGIVNVEIKLANLLFHFDWKMPNGNKPEELDMTESFGLSVRRKHDLYLIPCMYHSSTN	508

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi157g00002	508	Gene3D	Cytochrome P450	25	499	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PANTHER	OS08G0105600 PROTEIN	63	503	-	-
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	67	86	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	400	424	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	446	469	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	296	313	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	316	342	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	91	112	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	359	377	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi157g00002	508	PRINTS	E-class P450 group I signature	436	446	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi157g00002	Gabi-Chr157	52171	54337	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi157g00002	17	503	Cytochrome P450	AT3G26300	41.935	4.36e-144	421

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi157g00002	-		-	gmx:100818000	822.002

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