Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi157g00002 ATGGAGCTACATCTCCAGAATATTCCCTCACCTGCGATGTTGTCCTTCTTTCTCTTCCTGTTCATGGTGTTTAGCATAGTTTGGAGATCAAAAACCAAGTCTTCAAACTCCAAGTTACCACCAGGGCCCCCAAAACTGCCACTTATTGGGAACATGCACAAGCTTGGTAAAATGCCTCATCAAGGCCTAACAAAATTAGCAAAGAAATATGGGCCTCTGATGCATATGAAACTTGGTGGTCTTTCCACCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTTATGAAGACACATGATATCATCTTTGCAAATAGGCCTCATGTTCTTGCAGCAGATGTTATCTCTTATGGTTCAAAGGGTATGAGCTTTTCCCCTTACGGAAGTTACTGGAGGCAGATGAGAAAGATTTGCACGTTTGAGCTACTAACACCAAAGCGTGTTGAATCATTTCAATCAATCAGGGAAGAGGAGGCATCAAATCTTATCAAACAGATATGTTTGAGTGAAGGGTCATCTATCAATCTTAGTAAGACGATTAGTTCCTTCTCCTATGGCTTAACATCACGAGTAGCCTTTGGAGGAAAATCCGAAGACCAAGAAGCATTCATAACTGTTATGAAGGATGTCTTAAAATTAGTTGCTGGTTTCTCTATAGCTGACTTGTATCCTTCAATTGAAGTGCTTCAAGTTTTGACAGGAATAAGGTCCAAAGCTGAGAAACTCCATCAAGAAATAGATAGAATCCTTGAGAAAATTGTCAGAGATCACAGACACACGAGTTCAGAAACAAAGGAAAACAATGAAAAAGTAGGTGAAGATCTAGTTGATGTCATGCTGAAGCTTCAGAAGCAGAACAACCTTGATCATCCTCTATCCGACAGCGTTATCAAAGCAACACTTTTGGATATCTTCAGTGCTGGAAGCGGTACTTCAGCAAAAACCATAGAGTGGGCAATGTCAGAACTTGTCAAAAATCCAAGGGTGATGGAAAGAGCACAAGTTGAAATAAGAAGGGTCTTTGATGGTAAAGGGCATGTAGATGAAGCTAACATTCATGAACTGAAATACTTAAAGTCAGTTATCAAAGAAACCTTGCGTCTACATCCTCCTGTTCCATTATTACTACCAAGGGAATGCAGTGAGAGATGTGAAATTAATGGTTATGAGATACCAGCTAAAAGTAAGGTTATTGTTAATGCTTGGGCAATTGGGAGGGATCCAAACTACTGGATTGAAGCTGAGAAGTTTTATCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGTAGATTTTCAGTTTATCCCATTTGGTGTTGGAAGGAGGATGTGTCCTGGCATTACATTTGGCATTGTTAATGTTGAAATCAAACTAGCAAATTTGCTTTTCCATTTTGATTGGAAGATGCCCAATGGGAATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGTCTGTAAGAAGAAAACATGATTTGTACTTGATTCCTTGTATGTATCACTCATCTACTAATTAA 1527 0.3942 MELHLQNIPSPAMLSFFLFLFMVFSIVWRSKTKSSNSKLPPGPPKLPLIGNMHKLGKMPHQGLTKLAKKYGPLMHMKLGGLSTIVVSSPEMAKEVMKTHDIIFANRPHVLAADVISYGSKGMSFSPYGSYWRQMRKICTFELLTPKRVESFQSIREEEASNLIKQICLSEGSSINLSKTISSFSYGLTSRVAFGGKSEDQEAFITVMKDVLKLVAGFSIADLYPSIEVLQVLTGIRSKAEKLHQEIDRILEKIVRDHRHTSSETKENNEKVGEDLVDVMLKLQKQNNLDHPLSDSVIKATLLDIFSAGSGTSAKTIEWAMSELVKNPRVMERAQVEIRRVFDGKGHVDEANIHELKYLKSVIKETLRLHPPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWIEAEKFYPERFLDSSVDYKGVDFQFIPFGVGRRMCPGITFGIVNVEIKLANLLFHFDWKMPNGNKPEELDMTESFGLSVRRKHDLYLIPCMYHSSTN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi157g00002 508 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PANTHER OS08G0105600 PROTEIN 63 503 - -
Gabi157g00002 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 FunFam Cytochrome P450 71D8 32 500 - -
Gabi157g00002 508 SUPERFAMILY Cytochrome P450 40 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 Coils Coil 232 252 - -
Gabi157g00002 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gabi157g00002 508 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 CDD CYP71-like 69 496 - -
Gabi157g00002 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi157g00002 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi157g00002 Gabi-Chr157 52171 54337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi157g00002 17 503 Cytochrome P450 AT3G26300 41.935 4.36e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi157g00002 - - gmx:100818000 822.002