Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1579g00013 ATGGCCAAGCTCAGTATCAGAATTATTAGCAGCAAAAAGAAGGGTGAAGGTGGAATTGTGAAGCTCAAGTTTGTGGTGGAGAAGCTCCAAAAGAGGCTCTTACTGGGAAGAAAAAATAAAAGTGATTCAAGCAATGTGCCAGAGGATGTGAAGCAAGGACATTTTGCTGTTATCGCTGAGAGTGGGGAGGAACCAAAGAGATTCGTGATGCCATTAAGCTGTTTAAGCAACCCAACATTTTTGAAGCTATTAGAGGAAGCAGAACAAGAGTATGGCTTTGATCATGCATATGATGGCGCACTAACCATTCCTTGCACCCCTATTGAGCTTGAGAGGATACTCGCCCACCAATGTCTTCAAAGAGCACATTTTTAG 375 0.4293 MAKLSIRIISSKKKGEGGIVKLKFVVEKLQKRLLLGRKNKSDSSNVPEDVKQGHFAVIAESGEEPKRFVMPLSCLSNPTFLKLLEEAEQEYGFDHAYDGALTIPCTPIELERILAHQCLQRAHF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1579g00013 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 113 IPR003676 GO:0009733
Gabi1579g00013 124 Pfam Auxin responsive protein 37 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1579g00013 Gabi-Chr1579 168392 168766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1579g00013 5 105 Calmodulin-binding Proteins AT3G43120 41.667 2.24e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1579g00013 K14488 - gmx:102668167 154.066