Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1575g00006 ATGGCGAATGTGGCGATTGTTGAGCTTGACAAAAACTGTGCTAAGACAGTGGAAGAGATAGTGAAATTGGAGAGAAAGATCTTTCCCAAGCACGAATCACTCGCTTCATTCTTTGAAGATGAACTGAGAAAGAAGAACAGTGGTTTGCTTTATCTTCACGCGGATGGCGAACTTGTTGGCTATGTCATGTATTCTTGGCCTTCTTCCTTGTACGCCTCTATCACCAAGCTCGCAGAAGCTTCTGCCTCAGTATGTCATATTTTGGTTTTACTAGTGAAGGAGCAATGGAGGAGGCAAGGCCATGGAGAGGCACTTCTAAAAGCGGCAATTCAGAAATGCAGGGCAAGGAAAGTTTCGCGCCTAATGCTTCACGTGGATCCCTTGAGGACCCCTGCACTGAATCTTTACAAGAAACATGGTTTCCAAGTTGACAGTTTGATTGAAGGCTACTACTCCTCAGATAGAAATGCCTATAGAATGTATTTGGACTTCGATTCCAATTGA 504 0.4405 MANVAIVELDKNCAKTVEEIVKLERKIFPKHESLASFFEDELRKKNSGLLYLHADGELVGYVMYSWPSSLYASITKLAEASASVCHILVLLVKEQWRRQGHGEALLKAAIQKCRARKVSRLMLHVDPLRTPALNLYKKHGFQVDSLIEGYYSSDRNAYRMYLDFDSN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1575g00006 167 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 166 - -
Gabi1575g00006 167 CDD NAT_SF 55 124 - -
Gabi1575g00006 167 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 165 IPR000182 GO:0016747
Gabi1575g00006 167 Pfam Acetyltransferase (GNAT) family 19 141 IPR000182 GO:0016747
Gabi1575g00006 167 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 162 IPR016181 -
Gabi1575g00006 167 Gene3D - 6 166 - -
Gabi1575g00006 167 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1575g00006 Gabi-Chr1575 118123 119754 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi1575g00006 Acetyltransf_1 6.3e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1575g00006 - - gmx:100808090 266.929