Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1574g00017 ATGGCAAATCTGAATCATGATGCAACATCCTCAGATATTTTCTTCTATGATGTTTTTCTGAGTTTCAGAGGCGAACTCGGAAGCCGTTACGGATTTACAGATCATCTCTATAATGCATTGCGCCAAAAAGGAATCTACACTTTCAGAGATGACGAGGAGCTGAAGATAGGGGCAGAAATCAGACCTGCTCTTATGAAAGCAATCGAAAATTCCAGAATGTTAATGGTTGTTCTCTGTCAAAACTACGCATCTTCCACTTGGTGCCTTGATGAACTTGCCAAGATCGTTGACTGTCATGATAACAAAGGGAAACAAGTTCTTGTAATTTTTTACAAAGTGGAACCATCAGATGTATGGAACCAGAAAAATTCTTATGAAGCAGCCATGATTGAACATGAAAATAGATTCGGACAAGACTCGGACATGGTACAAGCATGGAGGAAAGCTTTGTCCAGAGTACGCGATCTAACCGGAGAACATTGCAAGGACAATATGTATGAACCTGAGCTTATCAACAAGATTGTTAAAGACGCCTCTGCTAAATTACCACCTCTGCCTTTACCAATTAAACACGTAGTTGGGCTTGATTCTCGCTTTGAACAGGTGAAATCAAGTATAGATATTGAGTCTCGTGATACCGTTTGCATGCTGGAAATTTATGGAGGTGGTGGCATAGGAAAAACCACATTTGCATTGGATATGTATAACAAGATCAGACATCATTTTGAAGCTGCAAGTTTTCTTGATAATGTCAGAGAAAAATCAAACAAAAGCACTAAAGGCCTGGAAGATCTCCAAAAGACACTTCTATCTGAGATGGGTGAGGAGACAGAAACAATGATGGGCAGTACATTTCAAGGAGGCTTTGAAATTAAACGCAGGCTTGGCCGTAAAAGAGTTCTTCTGATTCTTGATGATGTTGATTCCGTAAAACAATTGGAATCCCTGGCTGGAGGAGGTGATTGGTTTGGTTCTGGTAGCAGGATCATTATAACCACAAGGGATAAAACGATGATAGATAAGCATGTTATAGATGATGTTATCATTAAAAAATATAAAATGGAGGAGCTAAATGATGATGACTCTCTAGAACTCTTCTGTTGGCATGCCTTTAATATGAGTGGACCTGCAGAAAACTATGCAGGTGTTTCTAGTCGTGCAGTAAATTATGCAAAGGGTGTTCCGTTGGCTTTAAAAGTAATAGGCTCCAATTTGAAGGGTGGGAGCCTAGAGGATTGGGAAATGGAGTTGGACAAATATAAGAATATTCCAAATGCTGAGATCCAAGGTGTGCTTGAAATAAGCTACAATAGCTTGTCAGAGTTGGATCAGAAAACTTTCTTGGACATTGCTAGTTTTTTCAAAGGGGAGAGATGGGAATATGTCAAAAGGTTACTAAAGGCTTGTGATTTCTTCCCAATTATTCGAGTATTTGTTAGTAAATGTCTCATAATTATTGATGAAAATGGCTGCTTGGAGATGCATGATTTAATACAAGACATGGGTAGAGAGATTGTTAGAAAGGAGTCACCATTAAACCCTGGAGACCGCAGCAGAATATGGTATCATAAAGAGGTTCTTCAAGTGCTTACAGAAAACTCAGGAAGTAGTAGAGTTGAAGGAATAATGCTTGATCCCCCAAGTCACGAAGAAGTAAATCGTTGGATTGATACGGCCTTCGAGAAGATGAAGAACCTTAGAATTCTGATTGTTCGGAATACAGAATTTTCAACTGGACCAAGTTATTTACCAAATAGTTTGCGGTTAGTTGATTGGAAAGGGTACCCATCACAGTCTCTTCCACCAAATTTTTATCCCCACAGAATTGTTGATTTCAAGTTACCTCATAGTTCTCTGATGTTTAAAAAGCCATTTCAGATATTTGAGGATTTGACATTCATCAATCTCTCCCAGTGTCAATCCATAACTCATATACCTGATGTGTCTGGAGCAATAAATTTAAGAGTATTGACACTTGATAGATGCCATAAAGTGGTAGGGTTTGATAAATCCTTTGGATTTATGCCTAACCTTGTGTCTTTAAGTGCTTCCGAATGCAACATGCTCAAAAGTTTTGTGCCGGAAATGTATTTGCCATCTCTCGAGGTGCTTTCATTTAACTTTTGCAGAAGACTTGAAAGCTTCCCACATGTAATGCAAAAGATGGATAAGCCGTTAAGGATTCGCTTGGTAAATACTGCTATTAAGGAGCTTCCGAAGTCAATTCGCAACCTTGCTGGGCTTGAAAATGTAGACATGTCAATTTGCACAAGACTCAAGGATCTATCAAGTAGCTTCTTATTGTTGCCTAAACTTGTCACGTTAACACTTGATGGATGTTCCCAAGTTGGAGAATCATTTAAAAGGTTCAAAGAGAGACATTCAGTAGCAAATGGCTGCCCAAGTTTGACGACACTGAATCTAAGCGAGGCTAATCTGTCAGATGATCATCTTTATGCGATTTTTGAAAATTTTCCAAAACTGGAAGACTTGAATGTATCATACAACGATTTTGTATCTCTCCCAAAATGCATCAAAGGATCTTTGCACTTGAAAAATCTTGATGTGAGCTATTGCCGGAATCTTAGAGTAATTCCAGAACTTCCATTAAATATTCAGAAAGTAGAGGCAAGATATTGTGGATCGTTAACTACAAAGGCATCAAGCTTGCTATGGTCTAAGGTTTTTGGAGAGAAGGAAAGGATACAAGTTGTGATGCCAAAAGCGGAGATTCCAAATCTGTTTGACTTTGTTAGCAATGAAGAAATTCCGCTTTTCTGGGCTCGTAGGAAATTCCCTGTTATTGCTTTAGCATTCATGTTCGGGGAAGTCAGAGAGAATGAAGAGATACAGACACAGACACAGACAGACATCGTCTCAGAACTGTTACCTGGAATTATGTCAGATAAGTCCCACGTTGTTGGTCTCCACTTGTTTATAGACGGCCAAGAAATAAGTCGTAAAGACTACCATTATTGCAGCGTTGGAGAACATCATGTGTTACTGTGTGATCTAAGTGTTTTGTTCAATGATGAAGAGCGGCAGGGTCTTGATGCATGTGTTGGAGATGAATGGAAGGCTGTTCAGGTTCAAATTGAATCATGGTTGAATCTGAGTCGTTGGGGAGTTTATGTGTACAAAGAGAAAACAAATACAGAGGATATCCGATTCAGCCTCCCCAAATCAAACTCCTCAGGAGACAACTACATGCCAATACCACCAACAGGTTTGGTTCCAAAAAGAACTCCTGGGATGTCTAAGCAGAGGATAAGATACGTGTCAGAAAATCTTAGTCCAAGAGAAATATTTGGCGAGTATTTGCCTCTTTTAGATTTAGAAGAAACTCCCTCTTTTACAAAGGCATTAGTGAGGTCGTGGAGGAACACTAGGGCTGATATAAAAGGGGAAGCTTCAGCTTCATCCTCTGCCTCTGCCTCTGCCTATGGTGCAAGTTTAATGCAAGAACACGAACAATCTGGCTGGGATGTGGTACGGGTCGCAGAGTTGATGAAGGAGAATATGCCAAAACATATAGCTGATGTGTTCTCTTCTGCGGACATGCAAAGTGCACACCGAATTATTGAAGAATTTTTGAAGGCACGGGTAGAGTTTATAAAGGAAAAAGGCCATGACAGGTTGGACATTGATATGCCTATTATCCTAGAGGCGTGTCATCATCATTCTGATGAAGCTCCAAGCCGTCGCTACTGGGGGAAATTGCAGATAAAACACGGAGTTCCAACGTTCAAAGCAGTGTTGAGAAAGACAAGCCAACTTGCTTGGAGATTTTTGAACAAAGATACCTCTCAGGAGAGGATGAACATTGTTCTATTGAGATGTCAGCCTACATCTACTGGTGAAGCTTCAAGCTCTAGCCATGGGGAATCCTTGGAGGAAGGGTACTACGATCCTGTTTTGGAAGAATTGTTGAGCACAATAGAGGAAGATGCTATGCGGTTGAACAAATCTTACGGGAATTTGAAGGCATCTATTGTTCTAACTCATGACATGGTTTCCGACAAATATCTGATGGAAACTTTATTCCTCAGGGGACATGAAAATGTTGCACAAGGAAATTCAGGATTGGGAAACTTTGAATTGGGATTGTTGGGATTGGGAATGCTGGGATTGGGAATGTCAGGATTGGGAGGGTTGCAATCTAATTTCAAGAAGACACCTTACGGGAAGTTGAGGGTGGAGTAG 4203 0.4019 MANLNHDATSSDIFFYDVFLSFRGELGSRYGFTDHLYNALRQKGIYTFRDDEELKIGAEIRPALMKAIENSRMLMVVLCQNYASSTWCLDELAKIVDCHDNKGKQVLVIFYKVEPSDVWNQKNSYEAAMIEHENRFGQDSDMVQAWRKALSRVRDLTGEHCKDNMYEPELINKIVKDASAKLPPLPLPIKHVVGLDSRFEQVKSSIDIESRDTVCMLEIYGGGGIGKTTFALDMYNKIRHHFEAASFLDNVREKSNKSTKGLEDLQKTLLSEMGEETETMMGSTFQGGFEIKRRLGRKRVLLILDDVDSVKQLESLAGGGDWFGSGSRIIITTRDKTMIDKHVIDDVIIKKYKMEELNDDDSLELFCWHAFNMSGPAENYAGVSSRAVNYAKGVPLALKVIGSNLKGGSLEDWEMELDKYKNIPNAEIQGVLEISYNSLSELDQKTFLDIASFFKGERWEYVKRLLKACDFFPIIRVFVSKCLIIIDENGCLEMHDLIQDMGREIVRKESPLNPGDRSRIWYHKEVLQVLTENSGSSRVEGIMLDPPSHEEVNRWIDTAFEKMKNLRILIVRNTEFSTGPSYLPNSLRLVDWKGYPSQSLPPNFYPHRIVDFKLPHSSLMFKKPFQIFEDLTFINLSQCQSITHIPDVSGAINLRVLTLDRCHKVVGFDKSFGFMPNLVSLSASECNMLKSFVPEMYLPSLEVLSFNFCRRLESFPHVMQKMDKPLRIRLVNTAIKELPKSIRNLAGLENVDMSICTRLKDLSSSFLLLPKLVTLTLDGCSQVGESFKRFKERHSVANGCPSLTTLNLSEANLSDDHLYAIFENFPKLEDLNVSYNDFVSLPKCIKGSLHLKNLDVSYCRNLRVIPELPLNIQKVEARYCGSLTTKASSLLWSKVFGEKERIQVVMPKAEIPNLFDFVSNEEIPLFWARRKFPVIALAFMFGEVRENEEIQTQTQTDIVSELLPGIMSDKSHVVGLHLFIDGQEISRKDYHYCSVGEHHVLLCDLSVLFNDEERQGLDACVGDEWKAVQVQIESWLNLSRWGVYVYKEKTNTEDIRFSLPKSNSSGDNYMPIPPTGLVPKRTPGMSKQRIRYVSENLSPREIFGEYLPLLDLEETPSFTKALVRSWRNTRADIKGEASASSSASASAYGASLMQEHEQSGWDVVRVAELMKENMPKHIADVFSSADMQSAHRIIEEFLKARVEFIKEKGHDRLDIDMPIILEACHHHSDEAPSRRYWGKLQIKHGVPTFKAVLRKTSQLAWRFLNKDTSQERMNIVLLRCQPTSTGEASSSSHGESLEEGYYDPVLEELLSTIEEDAMRLNKSYGNLKASIVLTHDMVSDKYLMETLFLRGHENVAQGNSGLGNFELGLLGLGMLGLGMSGLGGLQSNFKKTPYGKLRVE 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1574g00017 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Gabi1574g00017 1400 Gene3D - 182 348 IPR027417 -
Gabi1574g00017 1400 SMART till_3 15 156 IPR000157 GO:0007165
Gabi1574g00017 1400 Gene3D Ribonuclease Inhibitor 548 727 IPR032675 -
Gabi1574g00017 1400 Gene3D Ribonuclease Inhibitor 728 893 IPR032675 -
Gabi1574g00017 1400 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Gabi1574g00017 1400 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Gabi1574g00017 1400 Pfam TIR domain 16 182 IPR000157 GO:0007165
Gabi1574g00017 1400 SUPERFAMILY L domain-like 494 867 - -
Gabi1574g00017 1400 Gene3D - 12 181 IPR035897 -
Gabi1574g00017 1400 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Gabi1574g00017 1400 PRINTS Disease resistance protein signature 391 405 - -
Gabi1574g00017 1400 PRINTS Disease resistance protein signature 294 308 - -
Gabi1574g00017 1400 PRINTS Disease resistance protein signature 216 231 - -
Gabi1574g00017 1400 PRINTS Disease resistance protein signature 743 759 - -
Gabi1574g00017 1400 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Gabi1574g00017 1400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 762 IPR044974 GO:0006952
Gabi1574g00017 1400 Gene3D - 356 440 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1574g00017 Gabi-Chr1574 211913 217507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1574g00017 16 780 WRKY Transcription Factor Family AT4G12020 31.305 3.71e-83 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1574g00017 - - tpra:123920924 1853.95