Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi156g00013 ATGACAGTATCAGTATCAATGGCTTCTCCCTCCCTCATTCTTGTATTGTTGTTACTCACAGCCACAGCCACAGCAGCATCAGCAGTAACTGCATCAGATAAAGAAAAGAAAACATTCATAGTACAAGTCCAGCATGAAGCCAAGCCTTCCATTTTCCCAACACACAACCATTGGTACCTCTCTTCCTTAGCTTCCATCACTCCCTCCGCCTCCATTATCCACACTTACCAAACTGTATTTCACGGTTTCTCTGCAAAGCTCTCAACTTTAGAGGCTCAGAAGCTCCAATCACTCTCCCACGTCATAACCCTCATTCCGGAGCAGGTTCGCCACCTCCACACCACGCGTTCCCCACAGTTCTTGGGCCTCAAGATCGCTGACAGAGCCGGCTTGCTCAAAGAGTCTGATTTCGGGTCGGATCTAGTAATCGGAGTCATCGACACCGGTATATGTCCCGAGAGGCAGAGCTTCAACGATCGTGATCTGGGTCCTGTTCCCCCCAAGTGGAAGGGCCAGTGTGTCGCCGGAAAAAACTTCCCTGCCAGCTCCTGTAACCGGAAGCTCATCGGAGCTCGCTATTTCTGCGGCGGGTACGAAGCCACCAACGGAAAAATGAACGAGACGTTGGAGTACCGTTCTCCGAGAGACTCGGACGGTCACGGAACTCACACGGCTTCTATCGCCGCCGGAAGGTACGTGTTCCCGGCGTCCACACTCGGTTACGCCAAAGGAATGGCGGCTGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAAGTTTGCTGGAACGGCGGCTGCTACGACTCCGACATCCTCGCCGCATTCGACGCCGCCGTGTCTGACGGTGTGGACGTCGCTTCCCTCAGTGTGGGGGGTGTGGTGGTCCCGTACTACCTGGACGTTATCGCCATGGGGGCTTTCGGAGCCTCCGAGGCTGGTGTTTTTGTCTCTGCCTCCGCCGGAAACGGCGGTCCCGGTGGCCTCACCGTTACCAATGTAGCACCTTGGGTGACCACTGTTGGGGCGGGAACCATAGACAGAGATTTCCCAGCTGATGTAAAGCTTGGGAACGGTAAGACCATAGGTGGGGTTAGTGTTTATGGTGGACCGGGTCTGACACCGGGTCGGCTCTACCCGATTGTGTATGCGGGTAGTGAAGGTGGGGGTGATGGTTACTCTTCGTCCCTTTGCTTGGAAGATTCGTTGGATCCCAAGTTTGTGAAGGGGAAGATTGTTGTGTGTGACAGAGGGATAAATTCAAGAGCTGCTAAAGGTGAAGTGGTGAAAAAGGCAGGAGGAGTTGGCATGATTTTGGCCAATGGAGTCTTTGATGGTGAAGGCTTAGTGGCTGATTGCCATGTACTTCCCGCCACCTCTGTCGGTGCCGTCGGCGGCGATGAGATTCGGAAATACATCTCAACAGCTTCACAGTCACGGTCACCACCTACTGCAACAATAATATTCAAGGGTACCAGGCTTGGGATTAGGCCAGCCCCGGTTGTGGCATCTTTTTCTGCTAGAGGGCCTAACCCTGAGTCCCCTGAGATATTGAAGCCTGATGTTATTGCCCCTGGACTGAACATTCTTGCAGCTTGGCCCGATAGTATTGCACCTTCTGGGATTCATTCTGATGAGCGCAGGACAGAGTTTAACATACTATCAGGTACTTCCATGGCTTGCCCACATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCACACCCTGATTGGAGTCCTGCTGCTATTAGGTCTGCCCTCATGACTACTGCGTATACTGTTGATAATAGGGGAGGTTCCATGTTGGATGAGTCCACTGGTAATGTTTCCTCAGTATTTGATTATGGTGCTGGCCATGTTCATCCGGAGAAGGCCATGAACCCTGGCTTGATTTATGACATCTCTACTTATGATTATGTGGATTTCTTGTGCAATTCTAATTATACCGCTAAGAATATTAAAGTGATCACGAGAAAGGTTGCAGATTGCAGTGGGGCTAAGAAGGCAGGTCATGCTGGCAATTTGAATTATCCATCCTTATCTGCAGTGTTTCAACAATATGGAAAGCATAAGATGTCTACACACTTCATTAGAACTGTGACTAATGTTGGAGATCCAAACTCAGTCTACAAAGTCACTATTAGACCACCTGCAGGGATGGTGGTCACGCTGGAGCCAGAGACCCTATCTTTCAGGAGGTTGGGTCAGAAATTGAATTTCCTTGTTAGGGTGCAAGCTAGGGCAGTTAAGCTTTCCCCTGGAAGTTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGCAAACACACTGTCACAAGTCCCTTGGTTGTGACAATGCAGCAGCCTCTCTGA 2352 0.5094 MTVSVSMASPSLILVLLLLTATATAASAVTASDKEKKTFIVQVQHEAKPSIFPTHNHWYLSSLASITPSASIIHTYQTVFHGFSAKLSTLEAQKLQSLSHVITLIPEQVRHLHTTRSPQFLGLKIADRAGLLKESDFGSDLVIGVIDTGICPERQSFNDRDLGPVPPKWKGQCVAGKNFPASSCNRKLIGARYFCGGYEATNGKMNETLEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYAKGMAAGMAPKARLAVYKVCWNGGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYYLDVIAMGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVKLGNGKTIGGVSVYGGPGLTPGRLYPIVYAGSEGGGDGYSSSLCLEDSLDPKFVKGKIVVCDRGINSRAAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAVGGDEIRKYISTASQSRSPPTATIIFKGTRLGIRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDSIAPSGIHSDERRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGGSMLDESTGNVSSVFDYGAGHVHPEKAMNPGLIYDISTYDYVDFLCNSNYTAKNIKVITRKVADCSGAKKAGHAGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIRPPAGMVVTLEPETLSFRRLGQKLNFLVRVQARAVKLSPGSSSVKSGSIVWSDGKHTVTSPLVVTMQQPL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi156g00013 783 CDD Peptidases_S8_3 111 591 IPR034197 -
Gabi156g00013 783 FunFam subtilisin-like protease SBT1.5 346 493 - -
Gabi156g00013 783 Gene3D - 642 780 - -
Gabi156g00013 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 777 IPR045051 -
Gabi156g00013 783 Gene3D - 346 494 - -
Gabi156g00013 783 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Gabi156g00013 783 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Gabi156g00013 783 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gabi156g00013 783 FunFam Subtilisin-like protease SBT1.5 140 357 - -
Gabi156g00013 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Gabi156g00013 783 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Gabi156g00013 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Gabi156g00013 783 FunFam Subtilisin-like protease SBT1.5 642 780 - -
Gabi156g00013 783 SUPERFAMILY PA domain 404 474 IPR046450 -
Gabi156g00013 783 FunFam Subtilisin-like protease SBT1.9 27 113 - -
Gabi156g00013 783 ProSiteProfiles Serine proteases, subtilase domain profile. 117 625 - -
Gabi156g00013 783 Pfam PA domain 379 467 IPR003137 -
Gabi156g00013 783 SUPERFAMILY Subtilisin-like 112 629 IPR036852 GO:0004252|GO:0006508
Gabi156g00013 783 Pfam Subtilase family 138 606 IPR000209 GO:0006508|GO:0008236
Gabi156g00013 783 Gene3D Peptidase S8/S53 domain 140 638 IPR036852 GO:0004252|GO:0006508
Gabi156g00013 783 Pfam Fibronectin type-III domain 673 777 IPR041469 -
Gabi156g00013 783 CDD PA_subtilisin_like 352 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi156g00013 Gabi-Chr156 103560 106590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi156g00013 38 783 Subtilisin-like Serine Gene Family AT3G14240 79.973 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi156g00013 - - zju:107434872 1276.54