Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi156g00012 ATGTGGTGGAGATCAGCATCATTCATCCTGGACAGGCAGCAGCAGCAGCAGAACGACACCGATTTGAGGCCCGACTCCTCCCTGTCCATCACTCCTCCTCCGCCTACGGCTACAACCGAATCCTCAAACCCTAACCCTAACCCTAACCCTATGATTTCGGCTTACTATCAGACGAGAGCGGCGCACCACGGCGTTGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCTGCAATCGGACAGAACCCTGACCCTGAACCTCAACTCAGGGTCAACTTCCCCGATCCTGATAAGCCCTTCAGTGTCATTGATGAGTTTAATAACTGGCGGAAACAGCCCGATTTGGCCGAGGCCGTCGCCGCCATTCGCGCCCTCGCCGCCGTCATAAGGTCCAGCCAGGCTACCACTATGATGCAGCTTGAAATTGAGCTCAAGAACGCCTCTGATTCTCTCAAGTTGTGGGATACAACCTCTATCTCTTTGACAGCTGGCTGTGATCTGTTTATGCGATATGTAACAAGAACTTCTGCTTTAGAATATGAAGACTTCAATTCCGCTAAATCACGCTTAATTGAACGTGCCGAGAAGTTTGGGGAAATCTCCTACAAGGCTCGGAAAATTATAGCAATGTTGAGTCAAGATTTTATATTTGATGGGTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTCGAAGTTCTTAAGTTGGCAGCGCAAAATAAAAAACTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGATTGCGGTTGTCCAATGAGCTGGCCAAGCTCGATGTTCCTGTTAAACTTCTAATAGACTCTGCAGTTGCATACACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGGTGTTGTTGAAAGTGGGGGCATAATTAACATGATGGGGACATATCAAATTGCATTGGTTGCACACAGTATGAATAAACCTGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTTTTTACCCTCTTGACCAAAAGGATTTGGCCCCTGCCTTACGCCCTATTGATTTCGGTGTACCCATTCCATCCAAAGTTGAGGTTGAAAGGTCTGCGCGGGACTACACTCCTCCTCAATTTCTGACTCTGCTTTTCACGGATTTGGGTGTTCTTACTCCTTCTGTTGTTAGTGACGAGCTGATCCAGCTATACTTATAG 1197 0.4787 MWWRSASFILDRQQQQQNDTDLRPDSSLSITPPPPTATTESSNPNPNPNPMISAYYQTRAAHHGVVTSDWLAQAQAAIGQNPDPEPQLRVNFPDPDKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSQATTMMQLEIELKNASDSLKLWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARFYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQFLTLLFTDLGVLTPSVVSDELIQLYL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi156g00012 398 MobiDBLite consensus disorder prediction 8 52 - -
Gabi156g00012 398 FunFam Translation initiation factor eIF-2B subunit alpha 97 199 - -
Gabi156g00012 398 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 62 398 - -
Gabi156g00012 398 SUPERFAMILY NagB/RpiA/CoA transferase-like 114 397 IPR037171 -
Gabi156g00012 398 Gene3D - 202 398 IPR042529 -
Gabi156g00012 398 MobiDBLite consensus disorder prediction 1 52 - -
Gabi156g00012 398 Pfam Initiation factor 2 subunit family 112 386 IPR000649 GO:0044237
Gabi156g00012 398 Gene3D - 98 199 IPR042528 -
Gabi156g00012 398 FunFam Translation initiation factor eIF-2B subunit alpha 202 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi156g00012 Gabi-Chr156 91574 93891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi156g00012 1 398 Eukaryotic Initiation Factors Gene Family AT1G53880 79.648 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi156g00012 K03239 - gmx:100799015 659.448