Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1568g00006 ATGGGTGTCTCGGGGAAGTGGATTAAATCATTGGTTGGTCTAAAGAAATCAGAGAAGCCCGAGTCTTCAGAGAAGGATAGAAATGTGAGCAAGTTTCGGCATCGGAGAAAGCATTTGATCGAAATTGACAATAGTAAACTTCAAAATGAGTTTGATGATGACGTTACTCCACCTATTGGAGAAGCAGATCCTCGTTCAAACCTTGATGCCCATTATTCTCCTTCTACTTCACAACAAACACAGGATGCTGCACATAATCATCAAATTATGAGGGAAGAAAGGGCTGCAACATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTTCGAGCTTTGAAAGGATTGGTAAGACTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCGATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCCCGTGTTCGGGCAAGGCGTGTTCGCTTGGCACTGGAAAGTGAAACAGAACAACAGAATCTGCAGCAACAGCTTGCAAATGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCAGCCAAACGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGGCAACAAGCTCTTTCCTCTGAGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCATGGGAGAATCGCTTTCTTAACATTAATACCCGAGATGGAGTAATGGTAGACGAAAATGGAGTAATGGTAGACGAAAATGGTATCAAACCTCAGTTAAGATCTGCTAACACAAAATCAGTTCCATCCAAGATTCATCCAAACCTTGCCTCTCAGAAAACTGGTCCCTCTCTTTCTGATGGCTGTGATTCTTCTTCACCTAGTAAGTCAGCAGGTTTGCTAGAGTCATCAAACACACAGTCTGTTAAACCAAAGTCTAATGCAAATGTTCAAAATCCCATTGAAGAAGGCAACTCAAGATCTGAAACTGGAAGATCTCACAGTAATCCAAAGGAGAGAACCACACAGGTAGATAAACAGGCAAAAAAGCGATTATCTCTGCCTAACAATGGGAGAGATCCTGGGGCTCAAACAGCTAGATATCCTACTAGAACTAATATGAATGCGACACGTGGCAGGCGAAAGTCTATAAAGGATAAACCTAAGCTCAATGGAGTAGAGGTTGAGAATCTTACTAAATCAGTTCCACAGCCCACAGTTCTGTAG 1308 0.4343 MGVSGKWIKSLVGLKKSEKPESSEKDRNVSKFRHRRKHLIEIDNSKLQNEFDDDVTPPIGEADPRSNLDAHYSPSTSQQTQDAAHNHQIMREERAATCIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESETEQQNLQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQALSSEFEPDKSSWGWNWLERWMAVRPWENRFLNINTRDGVMVDENGVMVDENGIKPQLRSANTKSVPSKIHPNLASQKTGPSLSDGCDSSSPSKSAGLLESSNTQSVKPKSNANVQNPIEEGNSRSETGRSHSNPKERTTQVDKQAKKRLSLPNNGRDPGAQTARYPTRTNMNATRGRRKSIKDKPKLNGVEVENLTKSVPQPTVL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 69 85 - -
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 282 419 - -
Gabi1568g00006 435 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Gabi1568g00006 435 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 354 374 - -
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 285 353 - -
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 12 29 - -
Gabi1568g00006 435 SMART iq_5 114 135 IPR000048 GO:0005515
Gabi1568g00006 435 SMART iq_5 91 113 IPR000048 GO:0005515
Gabi1568g00006 435 Gene3D - 92 134 - -
Gabi1568g00006 435 Pfam IQ calmodulin-binding motif 93 113 IPR000048 GO:0005515
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 1 87 - -
Gabi1568g00006 435 MobiDBLite consensus disorder prediction 36 50 - -
Gabi1568g00006 435 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1568g00006 Gabi-Chr1568 148238 156800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1568g00006 1 394 IQD Protein Family AT3G22190 57.750 1.15e-124 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1568g00006 - - tpra:123923158 600.897