Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1568g00005 ATGGGTGTCTCGGGGAAGTGGATTAAATCATTGGTTGGTCTAAAGAAATCAGAGAAGCCCGAGTCTTCAGAGAAGGATAGAAATAAAGTAGGCAAGTTTCGGCATCGGAGAAAGCATTTGATCGAAATTGACAATAGTAAACTTCAAAATGAGTTTGATGATGACGTTACTCCACCTATTGGAGAAGCAGATCCTCGTTCAAACCTTGATGCCCATTATTCTCCTTCTACTTCACAACAAACACAGGATGCTGCACATAATCATCAAATTATGAGGGAAGAAAGGGCTGCAACATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTTCGAGCTTTGAAAGGATTGGTAAGACTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCGATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCCCGTGTTCGGGCAAGGCGTGTTCGCTTGGCACTGGAAAGTGAAACAGAACAACAGAATCTGCAGCAACAGCTTGCAAATGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCAGCCAAACGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGGCAACAAGCTCTTTCCTCTGAGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCATGGGAGAATCGCTTTCTTAACATTAATACCCGAGATGGAGTAATGGTAGACGAAAATGGAGTAATGGTAGACGAAAATGGTATCAAACCTCAGTTAAGATCTGCTAACACAAAATCAGTTCCATCCAAGATTCATCCAAACCTTGCCTCTCAGAAAACTGGTCCCTCTCTTTCTGATGGCTGTGATTCTTCTTCACCTAGTAAGTCAGCAGGTTTGCTAGAGTCATCAAACACACAGTCTGTTAAACCAAAGTCTAATGCAAATGTTCAAAATCCCATTGAAGAAGGCAACTCAAGATCTGAAACTGGAAGATCTCACAGTAATCCAAAGGAGAGAACCACACAGGTAGATAAACAGGCAAAAAAGCGATTATCTCTGCCTAACAATGGGAGAGATCCTGGGGCTCAAACAGCTAGATATCCTACTAGAACTAATATGAATGCGACACGTGGCAGGCGAAAGTCTATAAAGGATAAACCTAAGCTCAATGGAGTAGAGGTTGAGAATCTTACTAAATCAGTTCCACAGCCCACAGTTCTGTAG 1311 0.4333 MGVSGKWIKSLVGLKKSEKPESSEKDRNKVGKFRHRRKHLIEIDNSKLQNEFDDDVTPPIGEADPRSNLDAHYSPSTSQQTQDAAHNHQIMREERAATCIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESETEQQNLQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQALSSEFEPDKSSWGWNWLERWMAVRPWENRFLNINTRDGVMVDENGVMVDENGIKPQLRSANTKSVPSKIHPNLASQKTGPSLSDGCDSSSPSKSAGLLESSNTQSVKPKSNANVQNPIEEGNSRSETGRSHSNPKERTTQVDKQAKKRLSLPNNGRDPGAQTARYPTRTNMNATRGRRKSIKDKPKLNGVEVENLTKSVPQPTVL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 1 37 - -
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 51 88 - -
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 286 354 - -
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 70 86 - -
Gabi1568g00005 436 Pfam IQ calmodulin-binding motif 94 114 IPR000048 GO:0005515
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 283 436 - -
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 355 375 - -
Gabi1568g00005 436 MobiDBLite consensus disorder prediction 12 29 - -
Gabi1568g00005 436 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Gabi1568g00005 436 SMART iq_5 115 136 IPR000048 GO:0005515
Gabi1568g00005 436 SMART iq_5 92 114 IPR000048 GO:0005515
Gabi1568g00005 436 Gene3D - 93 135 - -
Gabi1568g00005 436 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Gabi1568g00005 436 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1568g00005 Gabi-Chr1568 148238 156800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1568g00005 1 395 IQD Protein Family AT3G22190 58.000 1.43e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1568g00005 - - tpra:123923158 601.282