Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1564g00010 ATGAAATTGCAACACATGTTTGAAAAGCAACCATCTCCTGATGCTTCAAATTATGCATCAAGCAGTGGCCTCTCTGGGGATGATAAAGAGATTGGGTATAGAGCTGCAACATCAAGCCATCAATGTCTTTTGGCCATTAACTCTGCTCTTCACTTCTTACCATTCAAAATTGACCTGAACTTTGCTCGCATGGTCATGGCAGAGGTGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCATTGCAAGCACACAATTCCAAAATGGTGCAGTTGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGATTGTGATAATTTTCTCTATAGGACCAATATCTTGTGCACATGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCAATTTACATAATAGCACAAACAGTAGGTTCTATGTCGGCAACATATATAGGTAGCCTTGTCTATGGCATAAAATCAGATGCTATGATGACACAGCCACTCCAAGGATGCAACTCAGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTGGTTGCAGCTTTGACATCTGAATCTCAATCAGTTGGCCATTTATCTGGCTTTGTTGCTGGAATAGCAATTGGGCTTGCTGTACTAATCACAGGCCCTGTCTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAATTTAAGGATATATGGATATACATCATAGCCCCAAGTGCTGGAGCTGTAGCAGGAGCTCTAATGTTTCGTTTCCTACGTATTAGAGACCAACATTGTAGCACTTTGTCATCACCAAACATCAGTGATGTTCATGTTGGTCGTCCCATACCCTTTTGTTCAAGTTAG 903 0.4186 MKLQHMFEKQPSPDASNYASSSGLSGDDKEIGYRAATSSHQCLLAINSALHFLPFKIDLNFARMVMAEVVGTFILMFCVCGIIASTQFQNGAVGLLEYAATAGLTVIVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPIYIIAQTVGSMSATYIGSLVYGIKSDAMMTQPLQGCNSAFWVEVIATFIIMFLVAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKDIWIYIIAPSAGAVAGALMFRFLRIRDQHCSTLSSPNISDVHVGRPIPFCSS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 ProSitePatterns MIP family signature. 120 128 IPR022357 -
Gabi1564g00010 300 Pfam Major intrinsic protein 60 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1564g00010 300 SUPERFAMILY Aquaporin-like 59 276 IPR023271 -
Gabi1564g00010 300 Gene3D Glycerol uptake facilitator protein. 44 281 IPR023271 -
Gabi1564g00010 300 MobiDBLite consensus disorder prediction 1 23 - -
Gabi1564g00010 300 PANTHER AQUAPORIN NIP2-1 45 277 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1564g00010 Gabi-Chr1564 194917 205167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1564g00010 2 283 Major Intrinsic Protein MIP AT5G37820 33.681 7.64e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1564g00010 K09874 - gmx:100817660 429.483