Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1564g00003 ATGGAATTTGAAACGTGGATTATAGCTTCGTTGGTTCTTTTGTTGCCAACTATGGTTTGGTTCTTAGTCACAACACTGTCCAAATCCAACACTTCTTCTTCTACCACCGCTATTCCAAAAGCTTACCCAATCATTGGTTCTGTGTTCTCCATTGCGGCGAACAAACACCGCCGAGTCCAATGGATCTCCGACATACTCAACAAAACACCGTCCTCCACCTTCGTCCTCCACCGTGCCTTCGGTTCCCGGCAAGTCTTCACGGCGAACCCCGCCGTGGTCCAACACATTCTGAAGAACAGCTTCCCACTCTACAACAAGGGATACACCTTGAGCCGTGCCCTCGGCGATTTCCTCGGCAACGGAATCTTCAACGCCAACGGCGAAAACTGGAAGTTCCAACGACAAATCTCAAGTCACGAATTCAACACCCGATCACTTCGGAAATTCGTTGAAACAGTCGTCGACGTTGAACTCTCCGATCGTCTCTTCCCCATTCTCTCCAAAGCCCAAAAAACAACACTCGTTATCGATTTCCAAGACATTCTCCAACGCTTCACCTTCGATAACATATGCAAAATCGCTTTCGGCTTCGACCCTGAGTACCTCATCCCTTCCCTGCCGGAAAAAACCGCGTTCGCCAAGGCTTTCGACGACGGAACAAGCCTCAGCAGCGAGAGGTTCAACTCCGCGATTCCTTTGTTCTGGAAGATGAAGAAGCTCCTCAACGTTGGATCCGAAAAACAACTGAAGAACGCAATCTCCGAAGTGAGAGGCTTGGCGAGAAAAATCACAAGAGAGAAAAAGCAAGAGCTAAAAGAAAAAGCGACGCTTGAAACCGTTGATGATCTTTTGTCACGGTTTTTGAGTTCAGGTCATTTGGATGAAGAGTTCTTAATAGACATAGTGATAAGCTTCATACTTGCAGGTAGGGACACAACCTCTGCAGCACTCACGTGGTTCTTTTGGCTTCTCTATAAGCACCCGCACGTGGAGCACGAGGTTCTCAAAGAGGTTAATGAAAAATCAGAGGCACCGGTTTATGATGAAGTTAAAGACATGGTTTACACTCACGCTGCGTTGTGTGAGAGCATGAGGCTTTACCCGCCGGTCCCTGTGGACACTAAGGAGGCTGTCAACGACGACGTTTTGCCAGATGGAACTTTTGTTAAGAAAGGGACGAGGGTTGCGTATCATATCTACGCTATGGGAAGATCCGATAAAATATGGGGTTCGGATTGGGCCCAGTTTCGACCCGAGAGGTGGCTGAATCGGGTTGAGGGGAAATGGAGCTTCGTTGGGGTGAGTCCTTTTGCTTATCCCGTGTTTCAGGCGGGTCCCAGGGTTTGTTTGGGTAAGGATATGGCGTTCTTGCAGATGAAGAGAGTGGTGGCTGGTGTTATGAGGCGGTTTAGGGTGGTGCCGGCGGTGGAGGAAGGGGTGGAGCCGGTGTACACTGCGCACCTAACTTCTCTGATGAAAGGTGGGTTCCCTGTAAGGATTGAGAACCTTAGCTAA 1515 0.4917 MEFETWIIASLVLLLPTMVWFLVTTLSKSNTSSSTTAIPKAYPIIGSVFSIAANKHRRVQWISDILNKTPSSTFVLHRAFGSRQVFTANPAVVQHILKNSFPLYNKGYTLSRALGDFLGNGIFNANGENWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLFPILSKAQKTTLVIDFQDILQRFTFDNICKIAFGFDPEYLIPSLPEKTAFAKAFDDGTSLSSERFNSAIPLFWKMKKLLNVGSEKQLKNAISEVRGLARKITREKKQELKEKATLETVDDLLSRFLSSGHLDEEFLIDIVISFILAGRDTTSAALTWFFWLLYKHPHVEHEVLKEVNEKSEAPVYDEVKDMVYTHAALCESMRLYPPVPVDTKEAVNDDVLPDGTFVKKGTRVAYHIYAMGRSDKIWGSDWAQFRPERWLNRVEGKWSFVGVSPFAYPVFQAGPRVCLGKDMAFLQMKRVVAGVMRRFRVVPAVEEGVEPVYTAHLTSLMKGGFPVRIENLS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1564g00003 504 CDD CYP86A 73 496 - -
Gabi1564g00003 504 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 Gene3D Cytochrome P450 21 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 Coils Coil 249 269 - -
Gabi1564g00003 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1564g00003 504 PANTHER CYTOCHROME P450 26 498 - -
Gabi1564g00003 504 Pfam Cytochrome P450 39 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1564g00003 Gabi-Chr1564 114410 115924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1564g00003 6 504 Cytochrome P450 AT3G48520 44.622 2.41e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1564g00003 K20769 K20768 gmx:100781020 716.842