Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1561g00003 ATGGCTGCTTCAACAATGGCACTCTCTTCTCCATCTTTGGCTGGGAAGGCAATCAAGCTTTCCCCATCCACCCAGGAGCTAGGCACTGGACGGGTCACCATGAGGAAAGCAGCAACATCCAAGAAGCCCGTTTCTTCTGGAAGCCCATGGTACGGCCCGGACCGTGTTTTGTACTTGGGCCCATTCTCTGGTGAGCCTCCATCATACCTGACTGGTGAATTCCCAGGTGACTACGGATGGGACACTGCTGGGCTTTCAGCAGACCCAGAGACATTTGCAAAGAACCGTGAGCTGGAGGTGATCCATTGTAGATGGGCCATGCTGGGAGCCCTAGGGTGCGTGTTCCCTGAGCTCTTGGCCCGAAATGGTGTGAAATTCGGTGAGGCAGTATGGTTCAAGGCAGGATCACAGATATTCAGCGAGGGTGGGCTTGACTACTTGGGTAACCCAAGCCTAATTCACGCACAAAGCATCCTTGCCATATGGGCTTGCCAAGTTTTATTGATGGGTGCCGTTGAGGGTTACCGTATTGCGGGTGGGCCTCTGGGTGAGGTGACAGACCCACTTTACCCAGGTGGGAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCATTTGCAGAGCTGAAGGTGAAAGAGATAAAGAATGGTCGGTTAGCAATGTTCTCAATGTTCGGATTCTTCGTTCAGGCCATTGTCACTGGAAAGGGTCCCTTGGAGAACCTTGCTGACCATCTCGCTGACCCTGTCAACAACAATGCTTGGGCTTATGCTACTAACTTCGTCCCTGGAAAGTGA 801 0.5281 MAASTMALSSPSLAGKAIKLSPSTQELGTGRVTMRKAATSKKPVSSGSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVLLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1561g00003 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Gabi1561g00003 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Gabi1561g00003 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Gabi1561g00003 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Gabi1561g00003 266 FunFam Chlorophyll a-b binding protein, chloroplastic 57 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1561g00003 Gabi-Chr1561 68113 69100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1561g00003 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 88.060 1.38e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1561g00003 K08912 - mus:104001037 517.309