Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1557g00004 ATGAGAAGAGAAGATTGTTCAATGATTTATTGGCATCTAAAGCTATTAATATTATTTGCAGGAAATGTACGAGTATTCTGCCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGAATTTCCAGATGACTATTCCATTCGTGTAAATACTGGTGAAGAATCCTTGTCTAATTCCAAGAAAGATTTTGAATTCGACAGAGTTTATGGACCTCATGTTGGACAAGCTGAGTTATTCACTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAGACACATTCCGGGAAGACACACACTATGGAAGGATCGAGCTATGATCGGGGTTTATATTCTCGTTGCTTTGAGGAGTTGTTTGATTTAGCCAACATGGATACAACCTCTACTTCTCGATATGAATTCTTTGTTACTGTTTGTGAGCTCTATAATGAACAGACAAAGGATCTACTTTTGGAATCAGGGAAAAGCATGCCTAAGATCTGTTTGGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAAAAAGTTGATAACCCTCTGGAATTCTCTACCGTTTTAAAAGCTGCATTTCAGAGTCGGGGAAATGACTCGTTAAAGATTAATGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTTGATCACTGATGAAAGCTCATATAGCAAACTCTATCTGGTTGACTTGGCTGGAAGTGAAGGTCTAATAACAGAAGATGATAGTGGGGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTGACATCCAAGAAAGATGTTATTCCTTATGAAAATTCAGTGCTAACTAAATTGCTTGCAGATTCACTTGGTGGCAGTGCAAAAACTCTTATGATTGTAAATGTGTGTCCAAGTGTTTCAAATTTATCCGACACATTGTTGTCTCTCAGTTTCTCTGCCAGAGCTCGAAATTCTGCATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCGAATGATACGCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATCCATGATCTAAAGCAAGAGGGTCTAGAACTCAAGCAAGCACTTAAAGATGCGAACGATCAGTGTGTTCTACTCTTCAATGAAGTGCATAAGGCATGGAAAGTTTCTTCTGCATTGCAAACCGATTTAAAGTTGGAACATATTTTGCTATCGGATAAGCATAAGATAGAGAAAGAACAAAATACTCAGCTTAGAAACCAAGTTGCTCAACTGTTACAGTTAGAACAAGATCAAAAATTGCAGATGCAGCAGCAAGATTCAACAATCGAAAGTTTGCAGGCTAAAATTAGAACCCTTGAAACTCAACTCAATGAAGCTCTTAGATCCAGCGAACCTAGGTCAACGTTTGTCTTACAGCCAGAGTCTGCAGCTCTATCCAATTCCAGACCAACTGGAGATGGCATGGACTCTTCTGCAGTAACCAAAAAACTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTGAGAAAGCCTCTGTGGCTGTGTCGCCTAAGCTTTCAAGTCCATTATCTCGGGGATCAGTTAGTGTTCAATCTCGAGATATGGGAAGGAATGGTACCAGCAACAGTACAAAAACTCATTCTAGGGATGTTCTTCCTTCATCTTTGGCCATTGACAAGAATGATGGCACAGTTACAGTAGTTAAATCTGGCTCTGAAGTAGTTAAAACTACCCCAGCAGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCAGATCGATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCAGCTGTTATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGAAGCTGTTTTCTCTTTTATTAGGAAGATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCCCGAGTTAGAGTTCTGTATATAAGATCTTTGCTCGCAAGATCCCCAGAGTTGCAACCAATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGGCGAATAGTGGGTTCAGTAGAACTTCCAGCCGAGCGAATAGTCCTCCAAGGTCTCCTGTGCAATATGTTGATATGCAGATCCAGCCATTTAAAGTGAATCTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTCTTGAAGATACGCGGGATAGATCAGGACTTCTGGAGACAGCAAGTAACTGGTGGAAAGCTTAGGGAAATTACTGATGAAGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCAGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAAAACTTTGACTTTCTATCGGTTACTGTAAATGATGCATCGGGGGATTCAACTGGTCAGTTGGAACTTCTCTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCACTGCCTCCCCACACTGATGCCCTTGGCCAGCTATTATTTGAATATTCGAAACATGTCTATACTTCTCAACTTCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACTGAAGAGGCTGAAGATGTTGCACAAGTGGCGAAACTACGTTCAGCTCTAGAATCTGTTAATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGTGGTTCACCTATTCAAAATCCTTCTACAGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTTGATGGCATATTAAAGCAAATCAAGGATATAACATCAAGACTTTCTTCCGTGAACATCATTAGCAAAAGTAAGAAAAGAACAGCGCTTGCTTCACTTGATGAGCTAAAAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGCACATTGCAGATGCTTGCCACGTGGTTGAGTCAATTGCTGAAGAAGATGACCACATTCAGGATCTATTACATATTGGCAGACCATCAATGGATCTGGGCTCTGGATCCGAAATTGAGGTCACACAGTGGAATGTACTCCAATTTAATACAGGCTCTGCCTTACCATTTATAATAAAATGTGGAGCAAGCTCTAATTCAGAATTAGTTATTAAAGCTGATGCTCGAGTTCAGGAACCTAAAGGTGGTGAAATTGTGAGGATTGCCCCTAGACCCTCCGTTTTGGAAAATTTGAGCTTGGAGGAAATGAAACAAGTATTTTCCGAACTACCTGAGGCTCTAAGCTTGCTTTCCCTAGCAAGGACTGCAGATGGCACTCGCGCACGGTATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCATCCCTTAAAGAATTGGTCAGTGAGCTCGAAAAAAGGGGTGTACTCAAAGATGTGAGAACTTGA 3513 0.4085 MRREDCSMIYWHLKLLILFAGNVRVFCRTRPLFEDEGPSVVEFPDDYSIRVNTGEESLSNSKKDFEFDRVYGPHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYSRCFEELFDLANMDTTSTSRYEFFVTVCELYNEQTKDLLLESGKSMPKICLGSPECFVELVQEKVDNPLEFSTVLKAAFQSRGNDSLKINVSHLIVTIHIFYNNLITDESSYSKLYLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSAKTLMIVNVCPSVSNLSDTLLSLSFSARARNSALSLGNRDTIKKWRDVANDTRKELYEKEKEIHDLKQEGLELKQALKDANDQCVLLFNEVHKAWKVSSALQTDLKLEHILLSDKHKIEKEQNTQLRNQVAQLLQLEQDQKLQMQQQDSTIESLQAKIRTLETQLNEALRSSEPRSTFVLQPESAALSNSRPTGDGMDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASVAVSPKLSSPLSRGSVSVQSRDMGRNGTSNSTKTHSRDVLPSSLAIDKNDGTVTVVKSGSEVVKTTPAGEYLTAALNDFDPDRYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIREAVFSFIRKMEPKRVMDTMLVSRVRVLYIRSLLARSPELQPIKVLPVECFLEKANSGFSRTSSRANSPPRSPVQYVDMQIQPFKVNLKPEKKSKFSSVVLKIRGIDQDFWRQQVTGGKLREITDEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVTVNDASGDSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKHVYTSQLQHLKDIAGTLATEEAEDVAQVAKLRSALESVNHKRRKILQQMRSDVALLTLENGGSPIQNPSTAAEDARLASLISLDGILKQIKDITSRLSSVNIISKSKKRTALASLDELKEQMPSLLEIDHPCAQRHIADACHVVESIAEEDDHIQDLLHIGRPSMDLGSGSEIEVTQWNVLQFNTGSALPFIIKCGASSNSELVIKADARVQEPKGGEIVRIAPRPSVLENLSLEEMKQVFSELPEALSLLSLARTADGTRARYSRLYRTLATKVPSLKELVSELEKRGVLKDVRT 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1557g00004 1170 MobiDBLite consensus disorder prediction 543 576 - -
Gabi1557g00004 1170 PANTHER KINESIN-LIKE PROTEIN KLP-3 20 511 IPR027640 GO:0003777|GO:0007018
Gabi1557g00004 1170 Coils Coil 420 443 - -
Gabi1557g00004 1170 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 PRINTS Kinesin heavy chain signature 94 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 PRINTS Kinesin heavy chain signature 237 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 Coils Coil 507 530 - -
Gabi1557g00004 1170 ProSiteProfiles Kinesin motor domain profile. 22 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 Pfam Kinesin motor domain 28 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 Coils Coil 353 387 - -
Gabi1557g00004 1170 SMART kinesin_4 20 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00004 1170 ProSitePatterns Kinesin motor domain signature. 236 247 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi1557g00004 1170 MobiDBLite consensus disorder prediction 476 504 - -
Gabi1557g00004 1170 Coils Coil 448 475 - -
Gabi1557g00004 1170 Gene3D Kinesin motor domain 17 336 IPR036961 -
Gabi1557g00004 1170 MobiDBLite consensus disorder prediction 476 501 - -
Gabi1557g00004 1170 FunFam kinesin-like protein KIN-14B isoform X1 10 337 - -
Gabi1557g00004 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 378 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1557g00004 Gabi-Chr1557 8324 70255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1557g00004 21 334 Calmodulin-binding Proteins AT5G65930 36.970 4.26e-48 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1557g00004 - - gmx:100818895 1926.37