Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1557g00002 ATGGCAGAACAAAGGAACCGATGGAGCTGGGATGTCACCGGCTTCGAGCCATGGAAGTCTTCGTCGTCGCCGCCGTTTCCGCCGCCGTCTCCGTCGGCCTCGGCGCCTGTTGAGCAAGAAGTTCGGAAACCTAGTTCGCCGTTGGTGAGGAGGTACTCCATTTCTGCTTCATCCGTTCTTCCACAGCCCAAGCACTCCATGGCCTCCAAGGTTCAGTTGTTGAGGGACAAAGTCAAGCTTGCTAGAGAAGACTATTTGCAGTTAAGACAAGAAGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCTCCGGTGATCAATGAGAAGAGAAGATTGTTCAATGATTTATTGGCATCTAAAGGAAATGTACGAGTATTCTGCCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGAATTTCCAGATGACTATTCCATTCGTGTAAATACTGGTGAAGAATCCTTGTCTAATTCCAAGAAAGATTTTGAATTCGACAGAGTTTATGGACCTCATGTTGGACAAGCTGAGTTATTCACTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAGACACATTCCGGGAAGACACACACTATGGAAGGATCGAGCTATGATCGGGGTTTATATTCTCGTTGCTTTGAGGAGTTGTTTGATTTAGCCAACATGGATACAACCTCTACTTCTCGATATGAATTCTTTGTTACTGTTTGTGAGCTCTATAATGAACAGACAAAGGATCTACTTTTGGAATCAGGGAAAAGCATGCCTAAGATCTGTTTGGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAAAAAGTTGATAACCCTCTGGAATTCTCTACCGTTTTAAAAGCTGCATTTCAGAGTCGGGGAAATGACTCGTTAAAGATTAATGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTTGATCACTGATGAAAGCTCATATAGCAAACTCTATCTGGTTGACTTGGCTGGAAGTGAAGGTCTAATAACAGAAGATGATAGTGGGGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTGACATCCAAGAAAGATGTTATTCCTTATGAAAATTCAGTGCTAACTAAATTGCTTGCAGATTCACTTGGTGGCAGTGCAAAAACTCTTATGATTGTAAATGTGTGTCCAAGTGTTTCAAATTTATCCGACACATTGTTGTCTCTCAGTTTCTCTGCCAGAGCTCGAAATTCTGCATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCGAATGATACGCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATCCATGATCTAAAGCAAGAGGGTCTAGAACTCAAGCAAGCACTTAAAGATGCGAACGATCAGTGTGTTCTACTCTTCAATGAAGTGCATAAGGCATGGAAAGTTTCTTCTGCATTGCAAACCGATTTAAAGTTGGAACATATTTTGCTATCGGATAAGCATAAGATAGAGAAAGAACAAAATACTCAGCTTAGAAACCAAGTTGCTCAACTGTTACAGTTAGAACAAGATCAAAAATTGCAGATGCAGCAGCAAGATTCAACAATCGAAAGTTTGCAGGCTAAAATTAGAACCCTTGAAACTCAACTCAATGAAGCTCTTAGATCCAGCGAACCTAGGTCAACGTTTGTCTTACAGCCAGAGTCTGCAGCTCTATCCAATTCCAGACCAACTGGAGATGGCATGGACTCTTCTGCAGTAACCAAAAAACTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTGAGAAAGCCTCTGTGGCTGTGTCGCCTAAGCTTTCAAGTCCATTATCTCGGGGATCAGTTAGTGTTCAATCTCGAGATATGGGAAGGAATGGTACCAGCAACAGTACAAAAACTCATTCTAGGGATGTTCTTCCTTCATCTTTGGCCATTGACAAGAATGATGGCACAGTTACAGTAGTTAAATCTGGCTCTGAAGTAGTTAAAACTACCCCAGCAGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCAGATCGATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCAGCTGTTATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGAAGCTGTTTTCTCTTTTATTAGGAAGATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCCCGAGTTAGAGTTCTGTATATAAGATCTTTGCTCGCAAGATCCCCAGAGTTGCAACCAATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGGCGAATAGTGGGTTCAGTAGAACTTCCAGCCGAGCGAATAGTCCTCCAAGGTCTCCTGTGCAATATGTTGATATGCAGATCCAGCCATTTAAAGTGAATCTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTCTTGAAGATACGCGGGATAGATCAGGACTTCTGGAGACAGCAAGTAACTGGTGGAAAGCTTAGGGAAATTACTGATGAAGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCAGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAAAACTTTGACTTTCTATCGGTTACTGTAAATGATGCATCGGGGGATTCAACTGGTCAGTTGGAACTTCTCTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCACTGCCTCCCCACACTGATGCCCTTGGCCAGCTATTATTTGAATATTCGAAACATGTCTATACTTCTCAACTTCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACTGAAGAGGCTGAAGATGTTGCACAAGTGGCGAAACTACGTTCAGCTCTAGAATCTGTTAATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGTGGTTCACCTATTCAAAATCCTTCTACAGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTTGATGGCATATTAAAGCAAATCAAGGATATAACATCAAGACTTTCTTCCGTGAACATCATTAGCAAAAGTAAGAAAAGAACAGCGCTTGCTTCACTTGATGAGCTAAAAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGCACATTGCAGATGCTTGCCACGTGGTTGAGTCAATTGCTGAAGAAGATGACCACATTCAGGATCTATTACATATTGGCAGACCATCAATGGATCTGGGCTCTGGATCCGAAATTGAGGTCACACAGTGGAATGTACTCCAATTTAATACAGGCTCTGCCTTACCATTTATAATAAAATGTGGAGCAAGCTCTAATTCAGAATTAGTTATTAAAGCTGATGCTCGAGTTCAGGAACCTAAAGGTGGTGAAATTGTGAGGATTGCCCCTAGACCCTCCGTTTTGGAAAATTTGAGCTTGGAGGAAATGAAACAAGTATTTTCCGAACTACCTGAGGCTCTAAGCTTGCTTTCCCTAGCAAGGACTGCAGATGGCACTCGCGCACGGTATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCATCCCTTAAAGAATTGGTCAGTGAGCTCGAAAAAAGGGGTGTACTCAAAGATGTGAGAACTTGA 3900 0.419 MAEQRNRWSWDVTGFEPWKSSSSPPFPPPSPSASAPVEQEVRKPSSPLVRRYSISASSVLPQPKHSMASKVQLLRDKVKLAREDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPVINEKRRLFNDLLASKGNVRVFCRTRPLFEDEGPSVVEFPDDYSIRVNTGEESLSNSKKDFEFDRVYGPHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYSRCFEELFDLANMDTTSTSRYEFFVTVCELYNEQTKDLLLESGKSMPKICLGSPECFVELVQEKVDNPLEFSTVLKAAFQSRGNDSLKINVSHLIVTIHIFYNNLITDESSYSKLYLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSAKTLMIVNVCPSVSNLSDTLLSLSFSARARNSALSLGNRDTIKKWRDVANDTRKELYEKEKEIHDLKQEGLELKQALKDANDQCVLLFNEVHKAWKVSSALQTDLKLEHILLSDKHKIEKEQNTQLRNQVAQLLQLEQDQKLQMQQQDSTIESLQAKIRTLETQLNEALRSSEPRSTFVLQPESAALSNSRPTGDGMDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASVAVSPKLSSPLSRGSVSVQSRDMGRNGTSNSTKTHSRDVLPSSLAIDKNDGTVTVVKSGSEVVKTTPAGEYLTAALNDFDPDRYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIREAVFSFIRKMEPKRVMDTMLVSRVRVLYIRSLLARSPELQPIKVLPVECFLEKANSGFSRTSSRANSPPRSPVQYVDMQIQPFKVNLKPEKKSKFSSVVLKIRGIDQDFWRQQVTGGKLREITDEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVTVNDASGDSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKHVYTSQLQHLKDIAGTLATEEAEDVAQVAKLRSALESVNHKRRKILQQMRSDVALLTLENGGSPIQNPSTAAEDARLASLISLDGILKQIKDITSRLSSVNIISKSKKRTALASLDELKEQMPSLLEIDHPCAQRHIADACHVVESIAEEDDHIQDLLHIGRPSMDLGSGSEIEVTQWNVLQFNTGSALPFIIKCGASSNSELVIKADARVQEPKGGEIVRIAPRPSVLENLSLEEMKQVFSELPEALSLLSLARTADGTRARYSRLYRTLATKVPSLKELVSELEKRGVLKDVRT 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1557g00002 1299 Coils Coil 482 516 - -
Gabi1557g00002 1299 MobiDBLite consensus disorder prediction 672 705 - -
Gabi1557g00002 1299 Coils Coil 549 572 - -
Gabi1557g00002 1299 ProSiteProfiles Kinesin motor domain profile. 151 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 SMART kinesin_4 149 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 Coils Coil 71 98 - -
Gabi1557g00002 1299 Gene3D Kinesin motor domain 96 465 IPR036961 -
Gabi1557g00002 1299 PRINTS Kinesin heavy chain signature 223 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 PRINTS Kinesin heavy chain signature 415 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 PRINTS Kinesin heavy chain signature 366 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 MobiDBLite consensus disorder prediction 605 630 - -
Gabi1557g00002 1299 ProSitePatterns Kinesin motor domain signature. 365 376 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi1557g00002 1299 Coils Coil 577 604 - -
Gabi1557g00002 1299 FunFam kinesin-like protein KIN-14B isoform X1 98 466 - -
Gabi1557g00002 1299 Pfam Kinesin motor domain 157 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00002 1299 MobiDBLite consensus disorder prediction 605 633 - -
Gabi1557g00002 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 507 IPR027417 -
Gabi1557g00002 1299 Coils Coil 636 659 - -
Gabi1557g00002 1299 MobiDBLite consensus disorder prediction 17 46 - -
Gabi1557g00002 1299 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 640 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1557g00002 Gabi-Chr1557 7105 70257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1557g00002 138 463 Calmodulin-binding Proteins AT5G65930 36.550 8.99e-50 191