Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1557g00001 ATGGCAGAACAAAGGAACCGATGGAGCTGGGATGTCACCGGCTTCGAGCCATGGAAGTCTTCGTCGTCGCCGCCGTTTCCGCCGCCGTCTCCGTCGGCCTCGGCGCCTGTTGAGCAAGAAGTTCGGAAACCTAGTTCGCCGTTGGTGAGGAGGTACTCCATTTCTGCTTCATCCGTTCTTCCACAGCCCAAGCACTCCATGGCCTCCAAGGTTCAGTTGTTGAGGGACAAAGTCAAGCTTGCTAGAGAAGACTATTTGCAGTTAAGACAAGAAGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCTCCGGTGATCAATGAGAAGAGAAGATTGTTCAATGATTTATTGGCATCTAAAGGAAATGTACGAGTATTCTGCCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGAATTTCCAGATGACTATTCCATTCGTGTAAATACTGGTGAAGAATCCTTGTCTAATTCCAAGAAAGATTTTGAATTCGACAGAGTTTATGGACCTCATGTTGGACAAGCTGAGTTATTCACTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAGACACATTCCGGGAAGACACACACTATGGTTGCTCTTTCTTTCTTTCGCTCTGAAGGATCGAGCTATGATCGGGGTTTATATTCTCGTTGCTTTGAGGAGTTGTTTGATTTAGCCAACATGGATACAACCTCTACTTCTCGATATGAATTCTTTGTTACTGTTTGTGAGCTCTATAATGAACAGACAAAGGATCTACTTTTGGAATCAGGGAAAAGCATGCCTAAGATCTGTTTGGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAAAAAGTTGATAACCCTCTGGAATTCTCTACCGTTTTAAAAGCTGCATTTCAGAGTCGGGGAAATGACTCGTTAAAGATTAATGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTTGATCACTGATGAAAGCTCATATAGCAAACTCTATCTGGTTGACTTGGCTGGAAGTGAAGGTCTAATAACAGAAGATGATAGTGGGGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTGACATCCAAGAAAGATGTTATTCCTTATGAAAATTCAGTGCTAACTAAATTGCTTGCAGATTCACTTGGTGGCAGTGCAAAAACTCTTATGATTGTAAATGTGTGTCCAAGTGTTTCAAATTTATCCGACACATTGTTGTCTCTCAGTTTCTCTGCCAGAGCTCGAAATTCTGCATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCGAATGATACGCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATCCATGATCTAAAGCAAGAGGGTCTAGAACTCAAGCAAGCACTTAAAGATGCGAACGATCAGTGTGTTCTACTCTTCAATGAAGTGCATAAGGCATGGAAAGTTTCTTCTGCATTGCAAACCGATTTAAAGTTGGAACATATTTTGCTATCGGATAAGCATAAGATAGAGAAAGAACAAAATACTCAGCTTAGAAACCAAGTTGCTCAACTGTTACAGTTAGAACAAGATCAAAAATTGCAGATGCAGCAGCAAGATTCAACAATCGAAAGTTTGCAGGCTAAAATTAGAACCCTTGAAACTCAACTCAATGAAGCTCTTAGATCCAGCGAACCTAGGTCAACGTTTGTCTTACAGCCAGAGTCTGCAGCTCTATCCAATTCCAGACCAACTGGAGATGGCATGGACTCTTCTGCAGTAACCAAAAAACTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTGAGAAAGCCTCTGTGGCTGTGTCGCCTAAGCTTTCAAGTCCATTATCTCGGGGATCAGTTAGTGTTCAATCTCGAGATATGGGAAGTACAAAAACTCATTCTAGGGATGTTCTTCCTTCATCTTTGGCCATTGACAAGAATGATGGCACAGTTACAGTAGTTAAATCTGGCTCTGAAGTAGTTAAAACTACCCCAGCAGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCAGATCGATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCAGCTGTTATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGAAGCTGTTTTCTCTTTTATTAGGAAGATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCCCGAGTTAGAGTTCTGTATATAAGATCTTTGCTCGCAAGATCCCCAGAGTTGCAACCAATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGGCGAATAGTGGGTTCAGTAGAACTTCCAGCCGAGCGAATAGTCCTCCAAGGTCTCCTGTGCAATATGTTGATATGCAGATCCAGCCATTTAAAGTGAATCTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTCTTGAAGATACGCGGGATAGATCAGGACTTCTGGAGACAGCAAGTAACTGGTGGAAAGCTTAGGGAAATTACTGATGAAGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCAGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAAAACTTTGACTTTCTATCGGTTACTGTAAATGATGCATCGGGGGATTCAACTGGTCAGTTGGAACTTCTCTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCACTGCCTCCCCACACTGATGCCCTTGGCCAGCTATTATTTGAATATTCGAAACATGTCTATACTTCTCAACTTCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACTGAAGAGGCTGAAGATGTTGCACAAGTGGCGAAACTACGTTCAGCTCTAGAATCTGTTAATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGTGGTTCACCTATTCAAAATCCTTCTACAGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTTGATGGCATATTAAAGCAAATCAAGGATATAACATCAAGACTTTCTTCCGTGAACATCATTAGCAAAAGTAAGAAAAGAACAGCGCTTGCTTCACTTGATGAGCTAAAAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGCACATTGCAGATGCTTGCCACGTGGTTGAGTCAATTGCTGAAGAAGATGACCACATTCAGGATCTATTACATATTGGCAGACCATCAATGGATCTGGGCTCTGGATCCGAAATTGAGGTCACACAGTGGAATGTACTCCAATTTAATACAGGCTCTGCCTTACCATTTATAATAAAATGTGGAGCAAGCTCTAATTCAGAATTAGTTATTAAAGCTGATGCTCGAGTTCAGGAACCTAAAGGTGGTGAAATTGTGAGGATTGCCCCTAGACCCTCCGTTTTGGAAAATTTGAGCTTGGAGGAAATGAAACAAGTATTTTCCGAACTACCTGAGGCTCTAAGCTTGCTTTCCCTAGCAAGGACTGCAGATGGCACTCGCGCACGGTATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCATCCCTTAAAGAATTGGTCAGTGAGCTCGAAAAAAGGGGTGTACTCAAAGATGTGAGAACTTGA 3906 0.4186 MAEQRNRWSWDVTGFEPWKSSSSPPFPPPSPSASAPVEQEVRKPSSPLVRRYSISASSVLPQPKHSMASKVQLLRDKVKLAREDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPVINEKRRLFNDLLASKGNVRVFCRTRPLFEDEGPSVVEFPDDYSIRVNTGEESLSNSKKDFEFDRVYGPHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMVALSFFRSEGSSYDRGLYSRCFEELFDLANMDTTSTSRYEFFVTVCELYNEQTKDLLLESGKSMPKICLGSPECFVELVQEKVDNPLEFSTVLKAAFQSRGNDSLKINVSHLIVTIHIFYNNLITDESSYSKLYLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSAKTLMIVNVCPSVSNLSDTLLSLSFSARARNSALSLGNRDTIKKWRDVANDTRKELYEKEKEIHDLKQEGLELKQALKDANDQCVLLFNEVHKAWKVSSALQTDLKLEHILLSDKHKIEKEQNTQLRNQVAQLLQLEQDQKLQMQQQDSTIESLQAKIRTLETQLNEALRSSEPRSTFVLQPESAALSNSRPTGDGMDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASVAVSPKLSSPLSRGSVSVQSRDMGSTKTHSRDVLPSSLAIDKNDGTVTVVKSGSEVVKTTPAGEYLTAALNDFDPDRYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIREAVFSFIRKMEPKRVMDTMLVSRVRVLYIRSLLARSPELQPIKVLPVECFLEKANSGFSRTSSRANSPPRSPVQYVDMQIQPFKVNLKPEKKSKFSSVVLKIRGIDQDFWRQQVTGGKLREITDEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVTVNDASGDSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKHVYTSQLQHLKDIAGTLATEEAEDVAQVAKLRSALESVNHKRRKILQQMRSDVALLTLENGGSPIQNPSTAAEDARLASLISLDGILKQIKDITSRLSSVNIISKSKKRTALASLDELKEQMPSLLEIDHPCAQRHIADACHVVESIAEEDDHIQDLLHIGRPSMDLGSGSEIEVTQWNVLQFNTGSALPFIIKCGASSNSELVIKADARVQEPKGGEIVRIAPRPSVLENLSLEEMKQVFSELPEALSLLSLARTADGTRARYSRLYRTLATKVPSLKELVSELEKRGVLKDVRT 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1557g00001 1301 Coils Coil 490 524 - -
Gabi1557g00001 1301 MobiDBLite consensus disorder prediction 680 708 - -
Gabi1557g00001 1301 Coils Coil 557 580 - -
Gabi1557g00001 1301 Coils Coil 71 98 - -
Gabi1557g00001 1301 PRINTS Kinesin heavy chain signature 223 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00001 1301 PRINTS Kinesin heavy chain signature 423 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00001 1301 PRINTS Kinesin heavy chain signature 374 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00001 1301 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 648 IPR027640 GO:0003777|GO:0007018
Gabi1557g00001 1301 Pfam Kinesin motor domain 157 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00001 1301 Coils Coil 585 612 - -
Gabi1557g00001 1301 ProSiteProfiles Kinesin motor domain profile. 151 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1557g00001 1301 Gene3D Kinesin motor domain 96 473 IPR036961 -
Gabi1557g00001 1301 FunFam kinesin-like protein KIN-14B isoform X1 98 474 - -
Gabi1557g00001 1301 Coils Coil 644 667 - -
Gabi1557g00001 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 472 IPR027417 -
Gabi1557g00001 1301 ProSitePatterns Kinesin motor domain signature. 373 384 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi1557g00001 1301 MobiDBLite consensus disorder prediction 17 46 - -
Gabi1557g00001 1301 SMART kinesin_4 149 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1557g00001 Gabi-Chr1557 7105 70258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1557g00001 138 471 Calmodulin-binding Proteins AT5G65930 35.714 9.47e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1557g00001 - - gmx:100796816 2119.74