Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1554g00011 ATGGCAACCTTCATCTCCAAGTCCAAGCCTCAACTCAGAAAACTCACTCTTCTCCTCAACATATCTTTCATCTCCCTTCTTTGTTTTCTTCTAAAAGCCTATCACCATCCATCCAAATCAAACTTTCATGGCCAGTCCAATGCCCCCCTCACAACCATCTTCAACCATGCTAGGTTGCTCAGTGATATTAGTGTTGATGGATGTAATGACCTCCACAAGTATTCAGATTGTAGTTCTAAGTGCTTATATGTCAAAACCCATCTTGATTGCAGGTCAAAAGGGTACATAAACTATCTTCAAATCTTCTATTGCAATATTGGTCAATCCCCAATTTTGGGACAAACTCTTCTTGCCTTATGGCTTGTGGTGTTGTTCTATCTTTTGGGTGACACAGCTTCCAATTACTTTTGCAACTCCTTACAAGGTCTTTCCAACATCTTGAGGCTCTCTCCCACCATTGCTGGAGTAACCTTGCTTTCTCTTGGAAATGGGGCTCCTGATTTTTTTGCAAGTGTTGTTTCTTTCACTGGAACCAGTGATGGTGCACTTGGCCTCAACAGCATCTTGGGAGGGGCTTTTTTTGTGTCTAGTGTTGTCTTGGGGATTATAAGCATTCTAGTTAGCCCAAGTCAAGTTGTAGTTGATAAGGCCAGTTTCATTAGGGATGTCCTTTTCTTCCTCTTCTCTCTGCTCATCCTCTTTATCATCATTTCTATTGGTAAAATTAGCTTGTTGGGTTCAATCTTCTATGTTTCTATCTACTTCCTTTATGTCTGTGTTGTCTCTGCTACACATTTCATCTATGGAGAGGAAAAGAAAGAAAGGGAGTTCTCAGTGTCTTCAGATGAGTTACTAGAATCTGGCATACCATTGTTGGGCTATGTTGATGATGACAAACCAAATTTCGCAGAGGAAGTGGTTGTTGTTGTTGAAGATAAGGAGGAAAAGCCAGAGAGTTTTGGTAATGATTCATTTGACTGTTTTTACTTGGGAAAGTTTTTACAAGTTCTAGAGTTACCTCTTTCCTTGCCAAGAAGGCTAACAATACCAGTGGTGAATGAAGAGAAGTGGTCAAAACCATATGCGGTTATATCTGTCACATTAGCACCAGTTATGTTGGCAGCAGTTTGTAATACACAGAGGGAGAACATGGGTTCAAGGAACTGTCTAGTTATGTATTTGACAGCTTCTTTGATTGGCATAGTTTTGGGGAATATGGCATGTGTGACTACCAATAGCTCTAGTCCACCAAAAAAATCCTTGTTTCCTTGGTTGGCAGGGGGTTTTGCAATGAGTGTAACATGGACTTATATAATTGCTGAGGAGCTGGTTTCCCTCTTGGTTTCAATTGGTAATATTATTGGTGTTAGTCCTACAATCCTTGGGTTAACTGTCCTAGCTTGGGGTAACTCTCTTGGGGATTTGATAGCCAATGGTGCCATGGCTATGAATGGTGGGACAGATGGTGCCCAAATGGCTATATCTGGCTGTTATGCAGGTCCTATGTTTAATACTTTGATGGGTTTGGGTGTCCCTCTTGTTCTCTCAGCTTGGTCTGATTATCCATACCCTTATGTCATTCCTAAGGACCATTCCCTATATGAAACCCTTCTATTCTTAATGGGAGGACTACTTTGGGCCCTTGTGATATTGCCTAAGAAGAATATGAGGATGGATAAGTTCTTGGGAGTAGGACTATTGAGTGTATACCTATGCTTTTTGTTTATAAGAATTGCCATGGCTATTGGTGTTCTGAAATTCTAG 1764 0.4087 MATFISKSKPQLRKLTLLLNISFISLLCFLLKAYHHPSKSNFHGQSNAPLTTIFNHARLLSDISVDGCNDLHKYSDCSSKCLYVKTHLDCRSKGYINYLQIFYCNIGQSPILGQTLLALWLVVLFYLLGDTASNYFCNSLQGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGTSDGALGLNSILGGAFFVSSVVLGIISILVSPSQVVVDKASFIRDVLFFLFSLLILFIIISIGKISLLGSIFYVSIYFLYVCVVSATHFIYGEEKKEREFSVSSDELLESGIPLLGYVDDDKPNFAEEVVVVVEDKEEKPESFGNDSFDCFYLGKFLQVLELPLSLPRRLTIPVVNEEKWSKPYAVISVTLAPVMLAAVCNTQRENMGSRNCLVMYLTASLIGIVLGNMACVTTNSSSPPKKSLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGNIIGVSPTILGLTVLAWGNSLGDLIANGAMAMNGGTDGAQMAISGCYAGPMFNTLMGLGVPLVLSAWSDYPYPYVIPKDHSLYETLLFLMGGLLWALVILPKKNMRMDKFLGVGLLSVYLCFLFIRIAMAIGVLKF 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1554g00011 587 Gene3D - 149 280 IPR044880 -
Gabi1554g00011 587 Gene3D - 361 579 IPR044880 -
Gabi1554g00011 587 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 586 - -
Gabi1554g00011 587 Pfam Sodium/calcium exchanger protein 425 578 IPR004837 GO:0016020|GO:0055085
Gabi1554g00011 587 Pfam Sodium/calcium exchanger protein 118 261 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1554g00011 Gabi-Chr1554 112540 114672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1554g00011 66 585 Antiporters AT5G17860 53.333 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1554g00011 K13754 - gmx:100811635 823.542