Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1553g00005 ATGGTGGATTGTACTGGAGAGGGTGTTATATTCATTGAGGCTGATGCTGATGTCACGCTTGAACAATTTGGTGATGCTCTTCAACCACCATTCCCATGCTGGGAGGAGCTCCTTTACGATGTTCCTGGTTCTGGAGAAGTACTTAACACTCCCCTTCTGCTTATACAGGTAACACGGTTGAAGTGTGGTGGTTTCATCACCGCTCTCAGGTTGAACCACACCATGAGTGACGCAGCTGGTTTCGTCCAATTCATGACTGCTTTGGGCGAAATAGCTTGTGGGCTGCACGAACCTTCAATCCTACCAATATGGCGCAGAGAGATTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAACAAATACCAGACACCAAAGGGACCATAATCCCCTTAGACGACATGGCACATCGCTCTTTCTTCTTTGGTCCCACTGAGGTATTTGCCATTCGTCGTCTCATTCCACATCATCAACAACAATGCTCCAATTTTGAAATCCTCACTGCATGCCTTTGGCGTTGTCGCACAATAGCATTGCAACCAGACAGTGATGAAGACGTTCGCATATTATGCATTGTTAATGCACGAGGCAAGTTTGACCCTCCATTACCAATTGGTTACTATGGTAATGCTTTTGCATTTTCTCCTGCGATTACAACCGCAGGGAAGTTGTGTGAAAATCCATTGGGGTATGCACTTGAATTAGTGAGGAAAGCAAAAGTTGATGTTACTCAAGAGTATATGCATTCATTGACAGATTTAATGTTCATTAAGGGAAGACCACATTTTACCGTGATAAGATCATATCTTGTGTCGGATGTGACACGTGCCGGGTTCGGAGAGGTTGATTTTGGTTGGGGAAATGCTGTTTACGGAGGACCGGCTAAGGGAGGTGTTGGAGCTATACCTGGTGTGGCAAGTTTTTACATACCCTTTAAAAATGCTAAAGGAGAGAAAGGTTTGGTTATTCCTATTTGTTTACAATCTGAAGCCATGGAGCGGTTTGTAAAAGTCTTGGATGGCACACTTAAGAACCATATCCAACCTAATATGGGTGTTCCAATTATCGATTCTTCTTTATAG 1098 0.4417 MVDCTGEGVIFIEADADVTLEQFGDALQPPFPCWEELLYDVPGSGEVLNTPLLLIQVTRLKCGGFITALRLNHTMSDAAGFVQFMTALGEIACGLHEPSILPIWRREILNARDPPRVTCTHREYEQIPDTKGTIIPLDDMAHRSFFFGPTEVFAIRRLIPHHQQQCSNFEILTACLWRCRTIALQPDSDEDVRILCIVNARGKFDPPLPIGYYGNAFAFSPAITTAGKLCENPLGYALELVRKAKVDVTQEYMHSLTDLMFIKGRPHFTVIRSYLVSDVTRAGFGEVDFGWGNAVYGGPAKGGVGAIPGVASFYIPFKNAKGEKGLVIPICLQSEAMERFVKVLDGTLKNHIQPNMGVPIIDSSL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1553g00005 365 Gene3D - 1 124 IPR023213 -
Gabi1553g00005 365 PANTHER ACYL TRANSFERASE 4 2 344 - -
Gabi1553g00005 365 Pfam Transferase family 2 342 - -
Gabi1553g00005 365 Gene3D - 125 344 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1553g00005 Gabi-Chr1553 61987 65252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1553g00005 2 344 Monolignol Biosynthesis Gene Families AT5G48930 28.453 2.39e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1553g00005 K19861 - gmx:100797017 628.246