Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1553g00003 ATGGCCCAATCACATGCCTCTCTGTTCTTTACAGTGCGGAGGAATAAGCCAGAGCTGGTAGCTCCGGCGAAACCCACACCTCGCGAACTGAAACTACTCTCAGACATTGACGACCAAGATGGTCTACGTTTCCAAATTCCGGCGATACAGTTCTATCGCTATGATCCAAAAATGGCAGGGAAAGACCCTGTTGAGGTCATTAGAAAAGCACTGGCGAAAACGCTTGTGTTTTATTATCCTTTTGCAGGTAGGCTTAGGGAAGGTGCTGGTAGAAAACTCATGGTGGATTGTACTGGAGAGGGGGTTATATTCATTGAGGCTGATGCTGATGTCACGCTTCAGCAATTTGGTGATGCTCTTCAACCTCCATTCCCATGCTGGGAGCAGCTCCTTTACGATGTTCCTGGTTCTGGAGAAGTACTTAACACTCCCCTTCTGCTTATACAGGTAACACGGCTCAAGTGCGGTGGTTTCATCTTCGCTCTCCGGTTAAACCACACTATGAGCGACGCAGCTGGTTTAGTCCAATTCATGACTGCTTTAGGCAAAATAGCTTGTGGAATGCACAAACCTTCAATCCTTCCAGTATGGTGCAGAGAGATTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATAGCGAATACGAACAAATACCAGACACCAAAGGGACCATAATCCCCTTAGACGATATGGCACATCGCTCTTTCTTCTTTGGTCCTACTGAGGTGTCTGCCATTCGTCGTCTTATCCCTCATCATCAATAA 771 0.4708 MAQSHASLFFTVRRNKPELVAPAKPTPRELKLLSDIDDQDGLRFQIPAIQFYRYDPKMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVIFIEADADVTLQQFGDALQPPFPCWEQLLYDVPGSGEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMTALGKIACGMHKPSILPVWCREILNARDPPRVTCTHSEYEQIPDTKGTIIPLDDMAHRSFFFGPTEVSAIRRLIPHHQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1553g00003 256 PANTHER ACYL TRANSFERASE 4 10 249 - -
Gabi1553g00003 256 Pfam Transferase family 13 250 - -
Gabi1553g00003 256 Gene3D - 11 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1553g00003 Gabi-Chr1553 26520 30571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1553g00003 19 231 Monolignol Biosynthesis Gene Families AT5G48930 35.681 1.03e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1553g00003 K19861 - gmx:100799685 441.81