Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1553g00002 ATGGCCCAATCACATGCCTCTCTGTTCTTTACAGTACGGAGGCATAAGCCAGAGCTGGTAGCTCCGGCGAAACCCACGCCTCGCGAACTGAAACTACTCTCAGACATTGACGACCAAGATGGTCTACGTTTCCAAATTCCAGTGATACAGTTCTATCGCTATGATCCAAAAATGGCAGGGAAAGACCCTGTTGAGGTCATTAGAAAAGCACTGGCGAAAACGCTTGTGTTTTATTATCCTTTTGCAGGTAGGCTTAGGGAAGGTGCTGGTAGAAAACTCATGGTGGATTGTACTGGAGAGGGTGTTATATTCATTGAGGCTGATGCTGATGTCACGCTTCAGCAATTTGGTGATGCTCTTCAACCTCCATTCCCATGCTGGGAGGAGCTCCTTTACGATGTTCCTGGTTCTGGAGAAGTACTTAACACTCCCCTTCTGCTTATACAGGTAACACGGCTCAAATGCGGTGGTTTCATCTTCGCTCTCCGGTTGAACCACACCATGAGCGACGCAGCTGGTTTAGTCCAATTCATGACTGCTTTAGGCGAGATAGCTCGTGGAATGCACAAACCTTCAATCCTTCCAGTATGGTGCAGGGAGATTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATATGAACAAATACCAGACACCAAAGGAACCATAATCCCCTTAGACGATATGGCACATCGCTCTTTCTTCTTTGGTCCTACTGAGATTTAA 738 0.4715 MAQSHASLFFTVRRHKPELVAPAKPTPRELKLLSDIDDQDGLRFQIPVIQFYRYDPKMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVIFIEADADVTLQQFGDALQPPFPCWEELLYDVPGSGEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMTALGEIARGMHKPSILPVWCREILNARDPPRVTCTHREYEQIPDTKGTIIPLDDMAHRSFFFGPTEI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1553g00002 245 Pfam Transferase family 12 224 - -
Gabi1553g00002 245 Gene3D - 11 219 IPR023213 -
Gabi1553g00002 245 PANTHER ACYL TRANSFERASE 4 10 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1553g00002 Gabi-Chr1553 18433 22552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1553g00002 19 231 Monolignol Biosynthesis Gene Families AT5G48930 35.681 2.22e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1553g00002 K19861 - gmx:100799685 436.802