Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1553g00001 ATGGCCCAATCACATGCCTCTCTGTTCTTTACAGTACGGAGGCATAAGCCAGAGCTGGTAGCTCCGGCGAAACCCACGCCTCGCGAACTGAAACTACTCTCAGACATTGACGACCAAGATGGTCTACGTTTCCAAATTCCAGTGATACAGTTCTATCGCTATGATCCAAAAATGGCAGGGAAAGACCCTGTTGAGGTCATTAGAAAAGCACTGGCGAAAACGCTTGTGTTTTATTATCCTTTTGCAGGTAGGCTTAGGGAAGGTGCTGGTAGAAAACTCATGGTGGATTGTACTGGAGAGGGTGTTATATTCATTGAGGCTGATGCTGATGTCACGCTTCAGCAATTTGGTGATGCTCTTCAACCTCCATTCCCATGCTGGGAGGAGCTCCTTTACGATGTTCCTGGTTCTGGAGAAGTACTTAACACTCCCCTTCTGCTTATACAGGTAACACGGCTCAAATGCGGTGGTTTCATCTTCGCTCTCCGGTTGAACCACACCATGAGCGACGCAGCTGGTTTAGTCCAATTCATGACTGCTTTAGGCGAGATAGCTCGTGGAATGCACAAACCTTCAATCCTTCCAGTATGGTGCAGGGAGATTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATATGAACAAATACCAGACACCAAAGGAACCATAATCCCCTTAGACGATATGGCACATCGCTCTTTCTTCTTTGGTCCTACTGAGGTATCTTCCATTCGTCGTCTTATTCCTCATCATCAACAACAATGTTCCAATTTCGAAATCCTCACTGCATGTCTTTGGCGTTGTCGCACAATAGCATTACAACCAGACAATGATGAAGAGGTTCGCATATTATGCATTGTTAATGCACGTGGCAAATTTGACCCTCCATTACCAATTGGTTACTATGGAAACGCTTTTGCATTTTCTCCCGCGGTTACAACCGCAGGGAAGTTATGTGAAAATCCATTGGGGTATGCACTTGCATTAGTGGGGAAAGCAAAAACTGATGTTACTCAAGAGTATATGCATTCATTGGCAGATTTAATGGTCATCAAGGGAAGACCACATTTCACTGTGGTGAGATCATATCTTGTGTCGGATGTGACACGTGCCGGGTTTGGAGATGTTGATTTTGGTTGGGGAAATGCTGTTTACGGAGGACCAGCTAAAGGAGGTGTTGGAGCTATACCTGGTGTGGCAAGCTTTTACATACCCTTTAAAAATACGAAAGGAGAGGAAGGTTTAGTTATACCTGTTTGTTTACCATCTGAAGCTATGGAGAGGTTTGTAAAAGTCTTGGATAGCACACTCAACAACCATGTCGAACCTACTATGAGTGTTCCAATTATCAATTCTCCTTTATAG 1377 0.4473 MAQSHASLFFTVRRHKPELVAPAKPTPRELKLLSDIDDQDGLRFQIPVIQFYRYDPKMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVIFIEADADVTLQQFGDALQPPFPCWEELLYDVPGSGEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMTALGEIARGMHKPSILPVWCREILNARDPPRVTCTHREYEQIPDTKGTIIPLDDMAHRSFFFGPTEVSSIRRLIPHHQQQCSNFEILTACLWRCRTIALQPDNDEEVRILCIVNARGKFDPPLPIGYYGNAFAFSPAVTTAGKLCENPLGYALALVGKAKTDVTQEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGDVDFGWGNAVYGGPAKGGVGAIPGVASFYIPFKNTKGEEGLVIPVCLPSEAMERFVKVLDSTLNNHVEPTMSVPIINSPL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1553g00001 458 Gene3D - 11 218 IPR023213 -
Gabi1553g00001 458 Gene3D - 219 438 IPR023213 -
Gabi1553g00001 458 Pfam Transferase family 12 435 - -
Gabi1553g00001 458 PANTHER ACYL TRANSFERASE 4 10 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1553g00001 Gabi-Chr1553 18433 22996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1553g00001 19 437 Monolignol Biosynthesis Gene Families AT5G48930 30.090 4.75e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1553g00001 K19861 - gmx:100797017 789.26