Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi154g00010 ATGGAAGGTGTTGATCAAAGTGGTATGCAAAGAACTAGTTCTGCATTTCCTAGACCCCCGAACCGATTGAATGTTATGCATATCAATCAAATGGGTGTTGCTGAGAACCAGAAAATTTCTGGTATACCACCCTCTCACCCCAATACCAATATTTCACCTACATCTCCTTATCCCCAATTTATAGCCTCACAATCCCAATCCCAATCCCATTTGGGTTCCCAGCGTTTGCGTTCTCATAATTTGAGTCCTGGGTCATCCCATTCCAGGTCTCTGTCTCAATCCTCATTTTTCTCTCTGGATTCCTTGCCCCCATTGAGCCCTTCCCCTTATCGTGAACCCGTTACGGCATCTGATGTGTCTAAGGAGGAAAGCTTGGCTACCTCTCACGCCCCGGTCCCTAACCGAGGTCATCAGGTTCAGCTTGGTCATTGTCTTCCACCTCGTAAAGGACACAGGCGCTCTAGCAGTGATTCCCCCTTAGGAATCTCTGGTTTTATTCAGTCTTTCCCTCAGTCGGTTCCTGCTGACAATGCTCCTTCTAGAGGAGAAAACAAAGGTTTTGAGAAGCCAATTCAGCTAGTATTGAAGGAGCCAATTAAGGATACGGATTGTGTTGATGGCTTCAGTGGAGAACCTGTGGATGGGAGAAAAGAGGATGCCCTGGATGATTTATTTAGTGCATATATGAGTTTGGACAACATTGATAATCTGAATTTTTCTGGTATGGAAGATAGCAGAACTAGTGGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTTATGTAAATGGAAAAACAACCGGTGCTTGGGGGGCAAGTTCAAGCTGTTCGGAAGAGAGGAGGGAAGGAGTCAAGAGGAGTTCTAATGGAGACATTGCACCTGGTGCCCGACACCGGAGAAGTTTCTCATTGGACAGTTCCTTGGAAAATTTTCGTGTTGAAGATGGATCACCTAATCTTCCTCCTTTGCAAAATCGAGCTGGTCAACACTCGCCTGGCGATTCAGTAGATGGTAAAACATCTGATATCAGTATGGAGTTTGGGAATGGTGAGTTTAGCTCAGAGGAGATAAAGAAGATAATGGAAAATGATAAACTTGCTGAAATTGCCATTTCTGATCCCAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCCCGCTCAAAGGAGCGGAAGATGCGGTACATTTCTGAATTGGAGCATAAGGTCCAAACTCTTCAGGCCGAGACAACCACATTGTCTACTCAGTATACCAAATTACAGATGGATAATTCAGAGCTTAAAACTGAGAATAACGAGTACAAATTGAGGCTTCAAGCCTTGGAACAACATTCACAATTGAAAGATGCTCTGAATGAGACCTTGGATGCTGAAGTGCGGCGCTTACGATGTGCAGTTGCAGAACTTGGCGGTGAGTCCCTCCTCTCAAGTCGCATGGCTCAGCAACGTGCTATTAACCAACAAATGTTGCAGTTACAGCATCATCAACAGCCAAGTCAGCTTAGACATTTTCAACTGCAAAACAGCCATTCTCAGGAAGAGACACAGACTCAGTCACAGCAGATTCAACGCAATAATGAATTGCAATCTCAGCGCCAGAATGGCAAAGCTACTGCCTACTGA 1635 0.4489 MEGVDQSGMQRTSSAFPRPPNRLNVMHINQMGVAENQKISGIPPSHPNTNISPTSPYPQFIASQSQSQSHLGSQRLRSHNLSPGSSHSRSLSQSSFFSLDSLPPLSPSPYREPVTASDVSKEESLATSHAPVPNRGHQVQLGHCLPPRKGHRRSSSDSPLGISGFIQSFPQSVPADNAPSRGENKGFEKPIQLVLKEPIKDTDCVDGFSGEPVDGRKEDALDDLFSAYMSLDNIDNLNFSGMEDSRTSGSKTVESSDNEVESYVNGKTTGAWGASSSCSEERREGVKRSSNGDIAPGARHRRSFSLDSSLENFRVEDGSPNLPPLQNRAGQHSPGDSVDGKTSDISMEFGNGEFSSEEIKKIMENDKLAEIAISDPKRAKRILANRLSAARSKERKMRYISELEHKVQTLQAETTTLSTQYTKLQMDNSELKTENNEYKLRLQALEQHSQLKDALNETLDAEVRRLRCAVAELGGESLLSSRMAQQRAINQQMLQLQHHQQPSQLRHFQLQNSHSQEETQTQSQQIQRNNELQSQRQNGKATAY 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi154g00010 544 MobiDBLite consensus disorder prediction 239 342 - -
Gabi154g00010 544 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 70 531 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 38 188 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 496 544 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 239 276 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 1 19 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 324 340 - -
Gabi154g00010 544 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 375 438 IPR004827 GO:0003700|GO:0006355
Gabi154g00010 544 Coils Coil 393 465 - -
Gabi154g00010 544 Pfam bZIP transcription factor 377 435 IPR004827 GO:0003700|GO:0006355
Gabi154g00010 544 CDD bZIP_plant_RF2 378 428 IPR044759 GO:0003700|GO:0006355
Gabi154g00010 544 SMART brlzneu 373 437 IPR004827 GO:0003700|GO:0006355
Gabi154g00010 544 MobiDBLite consensus disorder prediction 156 178 - -
Gabi154g00010 544 SUPERFAMILY Leucine zipper domain 377 427 IPR046347 GO:0003700|GO:0006355
Gabi154g00010 544 Gene3D - 374 437 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 1 23 - -
Gabi154g00010 544 MobiDBLite consensus disorder prediction 38 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi154g00010 Gabi-Chr154 129292 133961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi154g00010 41 495 bZIP Transcription Factor Family AT4G38900 46.407 4.85e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi154g00010 bZIP_1 3.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi154g00010 - - gmx:100787636 722.62