Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi154g00009 ATGGGGGTTCTTGTTCTTCTTTCGTTATTATCTATCCTCACTCTATTCATCATCCACAAACACAGAACAAACAGAGCAAGAGCACTTCTTCCACCTGGTCCTCCAGGTCTTCCACTCATTGGCAATCTCCACCAGCTTGATAACTCAGCCCCACATCGCTCCTTAAGCCAACTCTCCAAACGCTATGGACCTCTCATGTCGTTGCGCCTTGGCTCTGTTCCAACCTTGGTCGTTTCCTCAGCAAAAATGGCGACACAAGTCTTGAAAACACACGACCTCATCTTTGCAAGCAGACCATCCTTCCTTGGACCAAGGATATTGTCTTACAATTTCTTGGACTTGGGTTTCACACCTTATAGCCCTTACTGGAGAGAAATGAAAAAACTCTCTATCCTCCACCTCTTCAGCTCTCATCGTGTCCAATCCTTTCGTCCCATTCGAGAAGACGAGGTTGCCCAAATGATTCAAAAACTATCAGACCACAGAAGGAGCAGATTGCAGGTACTACTCAACGAGGCTCAAGCAATGATGACAGAATTTTACTTTTCAGATTATTTTCCATTGATGGGGTGGGTTGATAGAGTCAGGGGAATTCTATGGCGGCTTGATAAAACCTTCAAGGAGCTTGATGTGTTTTATGAACGAGTCATCCATGACCACATGGATCCCACAAGGCATAAAACCAATGACCAAGATGTAACGGACATCATTGATATCTTTCTCCAGATGATCAATGATCACTCATTCTCTTTTGATCTCACTCTTGATCATATAAAAGCTGTGCTTATGAACATCTTTACAGCAGGAACAGACCCGAGTTCAGCAGCAATAGTTTGGGCTATGACAGCATTGTTGAGGAATCCTGATGTGATGAAAAAGGTTCAAGGAGAAATAAGAGATTTATTTGGGGACAAAGATTTTGTAAATGAAGATGATATTGAAAGGCTTCCTTATCTTAAAGCAGTTGTTAAGGAGACATTGAGATTGTTTCCACCGTCACCGTTACTTTTGCCAAGAGAAACGATGGAAAGGTGCACCATAGATGGTTATGAGATTCAAGCCAAAACTCTTGTCTATGTTAACGCGTGGGCTATAGCAAGGGACCCTGAGAACTGGGAAGACCCAGAAAAGTTTTATCCTGAAAGGTTCCTTGGGAGTTCAATAGACTTAAAGGGTAAAGATTTTGAGGTGATTCCATTTGGAGCTGGAAGGAGAATGTGTCCTGCGAAGCACATGGCTGTGGTCACCGTTGAGCTTTCACTTGCTAATCTTCTCCACTCGTTTGATTGGGAAGTGCCTCGTGGGTTTGACAAAGATGACGTGTTAGACACGCAAGTGAAACCAGGAATAACTATGCACAAGAAAAATGATCTTTACCTTGTGGCCAAGAAACACTCTACAATCTCAATCATTTGA 1416 0.4294 MGVLVLLSLLSILTLFIIHKHRTNRARALLPPGPPGLPLIGNLHQLDNSAPHRSLSQLSKRYGPLMSLRLGSVPTLVVSSAKMATQVLKTHDLIFASRPSFLGPRILSYNFLDLGFTPYSPYWREMKKLSILHLFSSHRVQSFRPIREDEVAQMIQKLSDHRRSRLQVLLNEAQAMMTEFYFSDYFPLMGWVDRVRGILWRLDKTFKELDVFYERVIHDHMDPTRHKTNDQDVTDIIDIFLQMINDHSFSFDLTLDHIKAVLMNIFTAGTDPSSAAIVWAMTALLRNPDVMKKVQGEIRDLFGDKDFVNEDDIERLPYLKAVVKETLRLFPPSPLLLPRETMERCTIDGYEIQAKTLVYVNAWAIARDPENWEDPEKFYPERFLGSSIDLKGKDFEVIPFGAGRRMCPAKHMAVVTVELSLANLLHSFDWEVPRGFDKDDVLDTQVKPGITMHKKNDLYLVAKKHSTISII 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi154g00009 471 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PANTHER CYTOCHROME P450 71B11-RELATED 15 463 - -
Gabi154g00009 471 SUPERFAMILY Cytochrome P450 31 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 CDD CYP71-like 61 458 - -
Gabi154g00009 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Gabi154g00009 471 FunFam Cytochrome P450 83B1 160 461 - -
Gabi154g00009 471 Gene3D Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 Pfam Cytochrome P450 171 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 Pfam Cytochrome P450 31 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00009 471 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi154g00009 Gabi-Chr154 126764 128727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi154g00009 11 465 Cytochrome P450 AT3G26320 43.813 1.55e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi154g00009 - - aip:107646223 665.996