Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi154g00008 ATGGGGGTTCTTGTTCTTCTTTCGTTATTATCTATCCTCACTCTATTCATCATCCACAAACACAGAACAAACAGAGCAAGAGCACTTCTTCCACCTGGTCCTCCAGGTCTTCCACTCATTGGCAATCTCCACCAGCTTGATAACTCAGCCCCACATCGCTCCTTAAGCCAACTCTCCAAACGCTATGGACCTCTCATGTCGTTGCGCCTTGGCTCTGTTCCAACCTTGGTCGTTTCCTCAGCAAAAATGGCGACACAAGTCTTGAAAACACACGACCTCATCTTTGCAAGCAGACCATCCTTCCTTGGACCAAGGATATTGTCTTACAATTTCTTGGACTTGGGTTTCACACCTTATAGCCCTTACTGGAGAGAAATGAAAAAACTCTCTATCCTCCACCTCTTCAGCTCTCATCGTGTCCAATCCTTTCGTCCCATTCGAGAAGACGAGGTTGCCCAAATGATTCAAAAACTATCAGAGTACGATGCTTCCCATAAAGTTGTAAACTTGACAGAAATATTGATGTCTTTCACTTGCACTTCAATAAGTAGGATAGCTTTTGGGAAAAAGTATAGTTATGAATATGATGAGGTTGTTGAATTAGGAAGCCACAGAAGGAGCAGATTGCAGGTACTACTCAACGAGGCTCAAGCAATGATGACAGAATTTTACTTTTCAGATTATTTTCCATTGATGGGGTGGGTTGATAGAGTCAGGGGAATTCTATGGCGGCTTGATAAAACCTTCAAGGAGCTTGATGTGTTTTATGAACGAGTCATCCATGACCACATGGATCCCACAAGGCATAAAACCAATGACCAAGATGTAACGGACATCATTGATATCTTTCTCCAGATGATCAATGATCACTCATTCTCTTTTGATCTCACTCTTGATCATATAAAAGCTGTGCTTATGAACATCTTTACAGCAGGAACAGACCCGAGTTCAGCAGCAATAGTTTGGGCTATGACAGCATTGTTGAGGAATCCTGATGTGATGAAAAAGGTTCAAGGAGAAATAAGAGATTTATTTGGGGACAAAGATTTTGTAAATGAAGATGATATTGAAAGGCTTCCTTATCTTAAAGCAGTTGTTAAGGAGACATTGAGATTGTTTCCACCGTCACCGTTACTTTTGCCAAGAGAAACGATGGAAAGGTGCACCATAGATGGTTATGAGATTCAAGCCAAAACTCTTGTCTATGTTAACGCGTGGGCTATAGCAAGGGACCCTGAGAACTGGGAAGACCCAGAAAAGTTTTATCCTGAAAGGTTCCTTGGGAGTTCAATAGACTTAAAGGGTAAAGATTTTGAGGTGATTCCATTTGGAGCTGGAAGGAGAATGTGTCCTGCGAAGCACATGGCTGTGGTCACCGTTGAGCTTTCACTTGCTAATCTTCTCCACTCGTTTGATTGGGAAGTGCCTCGTGGGTTTGACAAAGATGACGTGTTAGACACGCAAGTGAAACCAGGAATAACTATGCACAAGAAAAATGATCTTTACCTTGTGGCCAAGAAACACTCTACAATCTCAATCATTTGA 1545 0.4214 MGVLVLLSLLSILTLFIIHKHRTNRARALLPPGPPGLPLIGNLHQLDNSAPHRSLSQLSKRYGPLMSLRLGSVPTLVVSSAKMATQVLKTHDLIFASRPSFLGPRILSYNFLDLGFTPYSPYWREMKKLSILHLFSSHRVQSFRPIREDEVAQMIQKLSEYDASHKVVNLTEILMSFTCTSISRIAFGKKYSYEYDEVVELGSHRRSRLQVLLNEAQAMMTEFYFSDYFPLMGWVDRVRGILWRLDKTFKELDVFYERVIHDHMDPTRHKTNDQDVTDIIDIFLQMINDHSFSFDLTLDHIKAVLMNIFTAGTDPSSAAIVWAMTALLRNPDVMKKVQGEIRDLFGDKDFVNEDDIERLPYLKAVVKETLRLFPPSPLLLPRETMERCTIDGYEIQAKTLVYVNAWAIARDPENWEDPEKFYPERFLGSSIDLKGKDFEVIPFGAGRRMCPAKHMAVVTVELSLANLLHSFDWEVPRGFDKDDVLDTQVKPGITMHKKNDLYLVAKKHSTISII 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi154g00008 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gabi154g00008 514 FunFam Cytochrome P450 83B1 17 504 - -
Gabi154g00008 514 Gene3D Cytochrome P450 16 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 Pfam Cytochrome P450 31 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 CDD CYP71-like 61 501 - -
Gabi154g00008 514 SUPERFAMILY Cytochrome P450 31 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PANTHER CYTOCHROME P450 71B11-RELATED 15 506 - -
Gabi154g00008 514 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi154g00008 514 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi154g00008 Gabi-Chr154 126764 128727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi154g00008 3 508 Cytochrome P450 AT4G31500 43.418 2.17e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi154g00008 - - gmx:606704 724.546