Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1549g00003 | ATGTCTGACGCTGTGATCAATGGGTTGGCTGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATACCCACTTCAAACCGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAAAGGCAAGAAGAGTCAAGGGACCCTCGAGCAAATGTGCCAGGTTGTAAAAGAAGAGGGGTGGGAACGGTTGTATGGAGGCTTGATGCCATCGCTAGTGGGTACAGCTACGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAATGCTGAAGCTGCTGCACTAAAGCAGAAGAAGATAGGCATTGGTGATGGATCAGTCGGGATTCTCGCCTCACTTCTTGTTGCTGCTTTATCTGGGTGTGTTAACGTGCTCTTAACAAATCCCATATGGTTAGTTGTTACTCGTATGCAGACGCAGAGAAAAGAGTTAAACAGAACTCCACCAGATCAGGGATTGTTAGTTGTCACCGAGCAAACAAATCTTTCTGCAGTTGAGCCTCTTCCTTATGGAACTAGCCATGTGATTCAAGAAATCTACAATGAAGCTGGAATTTGGGGTTTCTGGAAAGGTGTATTACCAACATTGATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCATGTTAAAGAAGTTAAAAAGAAAACGTGCTTGGAGTAAGAAGGGTAGCAACGGGGCAACTGCTTCAGAGATATTTCTTCTTGGAGCTTTAGCTAAGCTTGGAGCTACTATTGTAACTTATCCACTCCTAGTTGTAAAGGCAAGGCTTCAAGCTCGACAGGATGAAACTGGAGACAAGAGGCGCCATTATAAAGGTACATGGGATGCTATTATTAAGATGATGCACTATGAAGGTTTTTATGGATTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTGTTGTTCATGATGAAGGAAGAACTAGTTAAGGGAATTCATTTCTTGCTTGCCAAGGATGCTGCCAATACTTGA | 1008 | 0.4335 | MSDAVINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKGKKSQGTLEQMCQVVKEEGWERLYGGLMPSLVGTATSQGVYYYFYQIFRNNAEAAALKQKKIGIGDGSVGILASLLVAALSGCVNVLLTNPIWLVVTRMQTQRKELNRTPPDQGLLVVTEQTNLSAVEPLPYGTSHVIQEIYNEAGIWGFWKGVLPTLIMVSNPSIQFMLYETMLKKLKRKRAWSKKGSNGATASEIFLLGALAKLGATIVTYPLLVVKARLQARQDETGDKRRHYKGTWDAIIKMMHYEGFYGFYKGMGTKIVQSVLAAAVLFMMKEELVKGIHFLLAKDAANT | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1549g00003 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 91 | IPR018108 | - | |
Gabi1549g00003 | 335 | SUPERFAMILY | Mitochondrial carrier | 3 | 319 | IPR023395 | - | |
Gabi1549g00003 | 335 | MobiDBLite | consensus disorder prediction | 29 | 48 | - | - | |
Gabi1549g00003 | 335 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 1 | 325 | IPR044712 | GO:0006862|GO:0055085 | |
Gabi1549g00003 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 232 | 323 | IPR018108 | - | |
Gabi1549g00003 | 335 | Pfam | Mitochondrial carrier protein | 237 | 322 | IPR018108 | - | |
Gabi1549g00003 | 335 | Pfam | Mitochondrial carrier protein | 6 | 90 | IPR018108 | - | |
Gabi1549g00003 | 335 | Pfam | Mitochondrial carrier protein | 109 | 221 | IPR018108 | - | |
Gabi1549g00003 | 335 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 217 | IPR018108 | - | |
Gabi1549g00003 | 335 | Gene3D | Mitochondrial carrier domain | 9 | 327 | IPR023395 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1549g00003 | Gabi-Chr1549 | 53763 | 59091 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1549g00003 | 24 | 318 | Chloroplast and Mitochondria Gene Families | AT2G47490 | 29.900 | 2.55e-31 | 118 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1549g00003 | K13354 | - | gmx:100775784 | 569.311 |