Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1549g00001 ATGCCTTCTTCATCTTCTTCTGATTCTAGTGCACTCACTATCCTCTCAAAATGCAGTGTCTTCCCTCACCAGAAATCAACTATGGAAGACCTCAAGCTCTCTATCTCAGACCTTAACATGCTCTCTTGCCATTACATCCAAAAGGGTTGTCTCTTCACAACCCCGTCTCTTCCCTCTCACACTCTCATTCCTCACCTCATCACTTCCCTATCACGCGCTCTATCTCTCTTTCCCCCACTCGCCGGCAGATTCATAACTGACTCTCACGGCTACATCTACATCACATGCAACGACGCCGGCGTCGATTTCATCCACGCCACAGCCACCGACCTCAACATCGCCGACCTCTTGTCCCCACCCGATGTACCTCATGCCTTCACGGAACTCTTCCCCTTTCACCGGAAAATCAACTACACCGCCCATTTCTCTCCCATCATGGCCGTTCAGGTCACCGAGCTCGCCGACGGCGTCTTCATCGGCTGCGCCGTCAACCACGCCGTCACCGACGGTACATCTTTATGGAACTTCTTCAACACCTTCGCCGATGTTTCAAGGGGAGCCACGTGTGCCTCCAGGGTCCCGGACTTCCGCCGGGAATCCATCCTGATCTCGAAGGTCGTGCTCCTGTTGCCGGAAAGTGATGACATCACGGTGACGTTCAACCCCGACGAGGCCTTGCGCGAGAGGATTTTCAGCTTCGGGCGCGTGGCCATTCAGAAGCTGAAAGCGAGAGTGAACCAAACGTGGCGGGAAAACGTTGGTGCCGTTGAGTTGATGGGGAAGCTGAACAACGACCCTCAACTGAAAACGGTTACGAGAAAGGAAACTGAAACCGTCGAAACGACTGAGATCTCGTCGTTTCAGTCGTTGTGCGCGCTGATGTGGCAATGCGTGACGCGCGCGAGGAATCTTCTAGGGACGAAAACGACGACGTTTAGAATGGCAGTGAACATTCGCAACCGTCTAGAGCCTAAGTTGGGGGATTACTACTTCGGGAACGCGATTCAGAGCATACCCACGTGCGCCGCCGCGGGCGACGTGGTGTCTAGGAATTTGTGGTGGTGCGCGGAGGAGCTGAACAAGAACGTGAGGGCTTACGATAGCGCTATGGTGAGGCGGGCCATAGAGGATTGGGAGCGTGACCCGAAGTGCTTCCCGCTGGGGAACCACGACGGAGCAACGTTGCAGATGGGAAGCTCGCCGAGATTCCCAATGTACGACAATGATTTTGGATGGGGGAGGCCCTTGGCGGTGCGGAGCGGCGGAGCAAATAAGTTTGACGGGAAAATGTCGGCGTTTCCGGCTAGGGAAGGTGGCGGCGCCGTCGATTTGGAGGTGGTTTTGGCGCCTGAAACGATGGCGCGGCTCGAGTCTGATCCTGAGTTCATGCTTTACGCCTCTGGTCAGTCATGA 1413 0.5527 MPSSSSSDSSALTILSKCSVFPHQKSTMEDLKLSISDLNMLSCHYIQKGCLFTTPSLPSHTLIPHLITSLSRALSLFPPLAGRFITDSHGYIYITCNDAGVDFIHATATDLNIADLLSPPDVPHAFTELFPFHRKINYTAHFSPIMAVQVTELADGVFIGCAVNHAVTDGTSLWNFFNTFADVSRGATCASRVPDFRRESILISKVVLLLPESDDITVTFNPDEALRERIFSFGRVAIQKLKARVNQTWRENVGAVELMGKLNNDPQLKTVTRKETETVETTEISSFQSLCALMWQCVTRARNLLGTKTTTFRMAVNIRNRLEPKLGDYYFGNAIQSIPTCAAAGDVVSRNLWWCAEELNKNVRAYDSAMVRRAIEDWERDPKCFPLGNHDGATLQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPAREGGGAVDLEVVLAPETMARLESDPEFMLYASGQS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1549g00001 470 Gene3D - 12 208 IPR023213 -
Gabi1549g00001 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 463 - -
Gabi1549g00001 470 SUPERFAMILY CoA-dependent acyltransferases 43 187 - -
Gabi1549g00001 470 Gene3D - 223 461 IPR023213 -
Gabi1549g00001 470 Pfam Transferase family 12 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1549g00001 Gabi-Chr1549 12210 13622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1549g00001 36 457 Monolignol Biosynthesis Gene Families AT5G48930 28.246 1.28e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1549g00001 - - cam:101506439 699.893