Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1544g00025 ATGGAGGAGGTTGAGGTCTTTCTGCTGGCAATGAAAGTGGCTTCTTCACTTGCTCTTGCGGGCATTTTCAGCTGGATACTTTATCTGTATGGTAATCTGTGGCATAAGTCCCAAAGGGTCAGAAGGAAGCTCCAAATGCAAGGTATCAGAGGGCCTCCACCTTCTTTTCTACATGGGAATCTACCTGATATGCAGAGAATCCAATCTCAGGCTACCATAGCCAAAGCTCCTAGCTGCAACCATTCTGATCAGTTTCTAGCACATGACTACACCGACACCCTCTTCCCATATTTTGAACACTGGAGGAAACAATACGGTCTAGTGTACACTTACTCCACGGGGATGAAGCAACACCTCTATGTGAACCAACCGGATCTAGTGAGAGAAATGAACCAGTGTATCACTTTAGGTTTGGGTAAGCCTTCTTATGTAACAAACAGACTTGCACCCCTGCTTGGCAATGGCATTCTTAGAGCCAATGGGCATAGTTGGTCACATCAGAGGAAACTTGTTGCACCTGAGTTCTTCATGGGCAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCATCGCAGCCATTACTACTAAAATGGGAGCAATTTATTGCGTGCCAAGGAGGTGCCACAGCAGAAGTTAAAGTTGATGCTGATTTGAGGGGCTTCTCAGCTGATGTTATTTCAAGGGTTTGTTTTGGTCATTCTTATTCCAAAGGAAAGGAAGTTTTCTCAAAGCTTAGAAGCATCCAGAAGGCCATGTCCAAACAAGGTTTCCTTTTTGGGGTCAGCGGTTTCCGTGACAAACTGAATTTCTCCACAAAGAAGCAAAACGGGATTGCCAATTTGGAAAGAGAGATAGAGTCACTGATCTGGGAATTAGTGGAGGAACGCAAGCGAGAATGCTTAGAGACATCATCATCAGAAAAGGATCTGATGCAGTTACTGTTGGAAGCAGCCAATACCAATAGTGATCAAAATCTGGGGAAGGACTTTTCCAAGCGTTTCATTGTGGATAATTGCAAAAACATATACTTTGCTGGCCATGAAACTACTGCTGTTGCAGCCTCTTGGTGTTTGATGCTTCTTGCTTTACACCCAGAATGGCAATCTCGTATAAGGACAGAGGTCGCTGAACTTTGCCCCAGTGGCATTCCAGATGCAGATTCTCTCCCTCTGTTGAAAACGGTAACTATGGTGATTCAAGAAGTGCTACGTTTATATCCACCAGCAGCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATTGGAGACTTAAATGTTCCTAAAGGCGTTTGTTTATGGACACTGATCCCAACATTGCACAGAGATCCTGAAATTTGGGGAACAGAAGCGAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTCTCTAAGGCTTGCAAGTATCCTCAGGCATATGTGCCATTTGGATTGGGTACTCGCTTGTGCTTGGGGAAAAACTTTGCCATGGTTCAATTGAAGGTTGTGCTAGCCCTTATCATCTCAAAGTTCAGCTTCTCTCTATCTCCTAGCTATAGCCATTCTCCCGCATATAGAATGATTGTAGAACCAGGACATGGAGTATATATTCTCATTCAGAAAATTTGA 1608 0.4397 MEEVEVFLLAMKVASSLALAGIFSWILYLYGNLWHKSQRVRRKLQMQGIRGPPPSFLHGNLPDMQRIQSQATIAKAPSCNHSDQFLAHDYTDTLFPYFEHWRKQYGLVYTYSTGMKQHLYVNQPDLVREMNQCITLGLGKPSYVTNRLAPLLGNGILRANGHSWSHQRKLVAPEFFMGKVKGMVGLMIESSQPLLLKWEQFIACQGGATAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFSKLRSIQKAMSKQGFLFGVSGFRDKLNFSTKKQNGIANLEREIESLIWELVEERKRECLETSSSEKDLMQLLLEAANTNSDQNLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQSRIRTEVAELCPSGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAYEDIQIGDLNVPKGVCLWTLIPTLHRDPEIWGTEANEFKPERFSEGVSKACKYPQAYVPFGLGTRLCLGKNFAMVQLKVVLALIISKFSFSLSPSYSHSPAYRMIVEPGHGVYILIQKI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1544g00025 535 Coils Coil 278 298 - -
Gabi1544g00025 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Gabi1544g00025 535 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 SUPERFAMILY Cytochrome P450 89 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 Pfam Cytochrome P450 91 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PANTHER CYTOCHROME P450 FAMILY MEMBER 32 527 - -
Gabi1544g00025 535 Gene3D Cytochrome P450 33 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1544g00025 535 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1544g00025 Gabi-Chr1544 168052 177060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1544g00025 126 532 Cytochrome P450 AT5G24900 58.049 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1544g00025 K20661 - gmx:100815776 909.442