Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1536g00016 ATGGAGGCTCAATCTCCAACGCCATCCACTGCTCCGCCCTTATCCTCGGTGGCTCCGCCGCCACCCCACCTCAACTACCCAGACTCTTTGGATTCGTCCCCTCGCTCCCGGAACACGGACTCGTGGGACGAGCCCTACCCGCCGGCGTCCACGAAGCTCCGCCTGATGTGCAGCTACGGCGGTCACATCGTCCCCCGTCCACACGACAAGTCCCTCTGTTACGTCGGCGGCGACACCCGCATCGTGGTGGTGGAACGCAACACCTCACTCTCGGACCTATCCACGCGCCTCTCGAAGACGTTCCTGAACGGAAGAGGGTTCAGTCTCAAGTACCAGCTTCCCAGTGAAGACCTCGATTCCCTCATCTCCGTCACCACCGACGAGGACCTTGATAACATGATCGAGGAGTACGATCGAACAACCGCCGCGAATTCCGCCGTGAAACCCTCACGAATTCGCCTCTTCCTCTTCCCTAACAAACCCGATTCCACTCACTCCATTCCCCCAGAAATTCTTGATACCTCTGCTAAGTCCGAAGACTGGTTCCTCAACGCCCTAAACGGCGCCGGATTGCTCAACCGGGGCTTCTCCGAATCTGCCTCCGTCAATTGTCTTCTGGGTCTCGATGACGTTGACGTTGCAGGGAACAACCTCGAACCCGGTTCCAGAGAGGTTGTTGAGGCTGCTTCTCAGCCTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAGGATGTTCACTCTGTTCCTGATTCCCCTATGCTTGAGACCACTTCATCTTTTGGGTCTACTTCGTCGTCGCCGTCGCTGGCCAATTTGCCGCCGATTCGGGTTCATGTGGAGGATGGTGGTGGTGGTGGTGGGGTTAGGGTGCAGGATCAAAAGGTATTGGGGATTGAGGAACAGTTTGCTCAGATGGGTGTTGGTGTTGGACAGAAGCAGGATGAGGGTTTTGTTTTGCTGTCTTCTCCGCCGCCGCCTCCGGTTCCCACCACCCTTTCCGCTGCGGCGGTGGGTGTGCCGATCGGCTCTGCGGTGGTTGGTGGTGAATACCAGAACCGTATTATCTCAGATGATGAAAGATCGGATCATGGGGTGCCTGTGGGATATAGAAAACCACCAACTCCTCAGCCACAGACAGTGCCACAGCCACCGGCACAGCCACAGCCACAAACACACACACAGTCACATGCACCTCAATTTCAACAGAAGTCAACTGGCGCCGTTGATTTGCCTTCCCCTGATTCTGTTTCAAGTGATAGTAGCCTTACAAATGCAATGTCACGTCCTAAAACTGTGATCTATCAAGACCAATTTCAGATTCAATCTGGAACAACAAGGGTTCCTAGTAATCCTGTGGATCCCAAACTTAATGTGTCTGATCAACACAGTCGGATCCAGATGCAGCAACATTTACAGGACCCTGGATATTTATTGCAGCAGCAATTCGATCAGCAACACCAACAGCCTCAACAACAACAGCAGCAGCAGCAGCAGTTTATACATGGCGCACACTTCATTCACCCTAACTCTGCAATGCCTGCATACTATCATCCTGTATATCCTTCCCAGCAACAGCATCACCAGGTTTACTATGTGCCTGCAAGACAAGCCCAAGCTTACAACTTATCTATGCAGCAGGCTAACATGGGTGAATCTGCCACAAACATTCCTTCTAGCAGGCCCCAAAATCCGCCAAATCCTGCCTCATTGGTTCCACCATCTGCAGCTTACAACCCCATTAGAAATGCTCCCCATCCTAAAACTGAAATGACAGCAGCTGCTTACAGAACTGCAACTGCAGGAAACCCTCAGTTAGTTCAAGTTCCTTCAAGTCAGCATCAGCAACAATATGTCACTTACTCCCAGATCCACCATCCATCCCAGTCCATGGCCCCTAATTCTGCTGCCCCTGCTAATTATGCGTATGATTATGCGGATCCTTCTCATGCTCAAATATACTACTCCCAGCCTCTGGCGCCCACAATGCCTTCACAGTACCAGACCATGACTGCTGCTGCTGTGGTGCTGCCGGAAGTTTCTGCTCAGCATCCCTCCGATGGTATGAAGCAGCAGATAAGAACCTCACAGCAATAA 2094 0.5234 MEAQSPTPSTAPPLSSVAPPPPHLNYPDSLDSSPRSRNTDSWDEPYPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERNTSLSDLSTRLSKTFLNGRGFSLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTTAANSAVKPSRIRLFLFPNKPDSTHSIPPEILDTSAKSEDWFLNALNGAGLLNRGFSESASVNCLLGLDDVDVAGNNLEPGSREVVEAASQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGGGGGGVRVQDQKVLGIEEQFAQMGVGVGQKQDEGFVLLSSPPPPPVPTTLSAAAVGVPIGSAVVGGEYQNRIISDDERSDHGVPVGYRKPPTPQPQTVPQPPAQPQPQTHTQSHAPQFQQKSTGAVDLPSPDSVSSDSSLTNAMSRPKTVIYQDQFQIQSGTTRVPSNPVDPKLNVSDQHSRIQMQQHLQDPGYLLQQQFDQQHQQPQQQQQQQQQFIHGAHFIHPNSAMPAYYHPVYPSQQQHHQVYYVPARQAQAYNLSMQQANMGESATNIPSSRPQNPPNPASLVPPSAAYNPIRNAPHPKTEMTAAAYRTATAGNPQLVQVPSSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYDYADPSHAQIYYSQPLAPTMPSQYQTMTAAAVVLPEVSAQHPSDGMKQQIRTSQQ 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 1 47 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 29 45 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 441 466 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 370 388 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 389 423 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 354 423 - -
Gabi1536g00016 697 PANTHER OS05G0427100 PROTEIN-RELATED 25 519 - -
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 12 27 - -
Gabi1536g00016 697 SMART PB1_new 67 157 IPR000270 GO:0005515
Gabi1536g00016 697 MobiDBLite consensus disorder prediction 550 569 - -
Gabi1536g00016 697 Pfam PB1 domain 68 158 IPR000270 GO:0005515
Gabi1536g00016 697 Gene3D - 72 158 - -
Gabi1536g00016 697 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 72 159 - -
Gabi1536g00016 697 ProSiteProfiles PB1 domain profile. 52 159 IPR000270 GO:0005515
Gabi1536g00016 697 SUPERFAMILY CAD & PB1 domains 68 167 - -
Gabi1536g00016 697 CDD PB1_UP2 56 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1536g00016 Gabi-Chr1536 126361 129083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1536g00016 43 187 MAP Kinase Kinase Kinase AT5G57610 39.456 4.71e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1536g00016 - - gmx:100784396 912.909