Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1536g00009 ATGTACCCTTTTGTGTTTCTGTTTTACCTTCTTTGCTGCAACTCTCTTGCACCTGCACCTGTGGTGAATTCTCTGAATGCTGAAGGTTCTGTGCTTTTGACACTGAAGCAGTACATCACAGACCCACAAGGGTCTCTGAGTAACTGGAACTCTTCAAATGACAACCCTTGTTCATGGAATGGGATTACTTGCATGGACCAAACTGTTGTGTCCGTTAGTATCCCAAAGATGCAACTTTATGGCTCTCTTCCTTCTACTTTAGGATCTCTTTCACAGCTCCGCCATGTGAACTTTAGGAACAACAAGCTCTTTGGAAGCTTGCCTCCAGAGCTCTTTCAAGCTCAGAGACTGCAAAGTTTGGTGCTTTATGGCAATTCATTCTCTGGGTCTGTTCCAAATGAGATTCAGAAGCTCAGGTACCTCCAAACTCTAGATTTGTCACAAAATTTCTTTGTTGGGTCATTGCCTGCTACAATTTTTCAATGTAAGAGACTCAAAACCCTTATTCTAAGTCGAAACAACTTCACTGGTCCTTTGCCAGATGGGTTTGGTACTGGTTGGTTTTCTCTGGAAAAACTAGACCTTTCTTTCAATCAATTCAGTGGTTCAATCCCTAGTGACATGGGAAATCTATCTAGCCTTCAAGGAACTGTTGATTTGTCTCATAATCATTTCAGTGGTTCAATCCCAACCAGCCTTGGTAATCTGCCTGAGAAGGTTTACATTGATCTATCTTACAACAATTTAAATGGTCCAATACCCCAAAATGGTGCTTTAATGAACAGAGGACCAACTGCTTTTGTTGGAAATCCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGGCTCTGATACTCCACCTGCTAGTTCACCTTCCACATTTCCATTTCTGCCTCATAACTACCCACCTCAAAATACTGATAATGGTCCTGGGAAAAGTGAGAAAAACAAAGGGCTAAGTAAGGGTGCTGTGATAGGCATTGTTGTGGGTGATTTAATTGGAATTTGCCTTTTAGGTTGGCTGTTCTCTTACTGCTACTTAAGGGTTTGTGGTTTTAACCAGGACCTGGATGAAAATGGTGTTAGTAAGGGAAGGAAAGGAAGGAAAGAATGTTTCTGCTTCATAAAGGATGAATTCGAGGCTCTATCTGATAATGTTGAGCAGCATGATCTTGTCCCATTAGATACTCAAGTGTCCTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGTAGGAATGGAATAGGGATTATGTATAAAGTGGTGCTTGAAGATGGGCTTGCCTTGGCTGTGAGAAGATTGGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACAGAAGTAGAAGCAATAGGAAAGTTAAGACATCCAAATATTGTGACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGGCTGGACATGTCACGTTTACGCCGCTATCTTGGTCCTATCGATTGAAAATCATGAAAGGAACAGCAAAAGGATTGGTCTATCTGCATGAATTTAGCCCCAAAAAATATGTCCATGGAGATCTCAAGCCAAGTAACATACTTCTTGGACATAGCATGGAACCCCACATTTCTGATTTTGGACTCGGGCGCCTTGCAAATATTGCTGGAAGGTCCCCAACCTTGCAATCCAACCGAGTGGCAGCAGAGAAACTACTAGAAAGACAAGAAGAGAGCTTGTCCACAGAAGTTACAAATAATATTTTGGGAAACGGTTATCAGGCTCCAGAGGCAGTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGTGTGATTTTGTTAGAAATGATCACAGGAAGATCACCTGTTGTCCAAGTGGGTAACTCAGAAATGGACATTGTTCAATGGATTCGGTTCTGCATTGAGGAAAAGAGGCCACTCTCAGATGTATTAGACCCATACTTAGATGAAGATGCAGGTAATGAGGACGAGATAATTGCAGTTTTGAAGATTGCAATGGCTTGTGTCCATAGAAGCCCTGAAAAGAGACCTACAATGAGGCACGTACTTAATGCTTTGGACAGATTGTCCATTTCTTCTGATTGA 2142 0.4197 MYPFVFLFYLLCCNSLAPAPVVNSLNAEGSVLLTLKQYITDPQGSLSNWNSSNDNPCSWNGITCMDQTVVSVSIPKMQLYGSLPSTLGSLSQLRHVNFRNNKLFGSLPPELFQAQRLQSLVLYGNSFSGSVPNEIQKLRYLQTLDLSQNFFVGSLPATIFQCKRLKTLILSRNNFTGPLPDGFGTGWFSLEKLDLSFNQFSGSIPSDMGNLSSLQGTVDLSHNHFSGSIPTSLGNLPEKVYIDLSYNNLNGPIPQNGALMNRGPTAFVGNPGLCGPPLKNPCGSDTPPASSPSTFPFLPHNYPPQNTDNGPGKSEKNKGLSKGAVIGIVVGDLIGICLLGWLFSYCYLRVCGFNQDLDENGVSKGRKGRKECFCFIKDEFEALSDNVEQHDLVPLDTQVSFDLDELLKASAFVLGRNGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLATAIHGKAGHVTFTPLSWSYRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHSMEPHISDFGLGRLANIAGRSPTLQSNRVAAEKLLERQEESLSTEVTNNILGNGYQAPEAVKVVKPSQKWDVYSYGVILLEMITGRSPVVQVGNSEMDIVQWIRFCIEEKRPLSDVLDPYLDEDAGNEDEIIAVLKIAMACVHRSPEKRPTMRHVLNALDRLSISSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1536g00009 713 SMART LRR_typ_2 189 211 IPR003591 -
Gabi1536g00009 713 SMART LRR_typ_2 138 162 IPR003591 -
Gabi1536g00009 713 SMART LRR_typ_2 90 114 IPR003591 -
Gabi1536g00009 713 MobiDBLite consensus disorder prediction 279 316 - -
Gabi1536g00009 713 CDD STKc_IRAK 414 708 - -
Gabi1536g00009 713 SMART serkin_6 412 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1536g00009 713 MobiDBLite consensus disorder prediction 300 314 - -
Gabi1536g00009 713 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Gabi1536g00009 713 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Gabi1536g00009 713 SUPERFAMILY Protein kinase-like (PK-like) 413 705 IPR011009 -
Gabi1536g00009 713 Gene3D Transferase(Phosphotransferase) domain 1 484 712 - -
Gabi1536g00009 713 Pfam Leucine rich repeat 92 149 IPR001611 GO:0005515
Gabi1536g00009 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 709 IPR046959 -
Gabi1536g00009 713 FunFam Leucine-rich repeat protein kinase family protein 484 711 - -
Gabi1536g00009 713 Gene3D Ribonuclease Inhibitor 19 78 IPR032675 -
Gabi1536g00009 713 Gene3D Ribonuclease Inhibitor 79 285 IPR032675 -
Gabi1536g00009 713 FunFam Leucine-rich repeat receptor-like protein kinase 391 483 - -
Gabi1536g00009 713 Gene3D Phosphorylase Kinase; domain 1 380 483 - -
Gabi1536g00009 713 ProSiteProfiles Protein kinase domain profile. 408 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1536g00009 713 SUPERFAMILY L domain-like 27 279 - -
Gabi1536g00009 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 185 - -
Gabi1536g00009 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Gabi1536g00009 713 Pfam Protein kinase domain 414 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1536g00009 Gabi-Chr1536 77944 80222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1536g00009 1 713 Receptor kinase-like Gene Family AT2G01210 65.560 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi1536g00009 Pkinase 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1536g00009 - - gmx:100792873 1199.11