Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1536g00002 ATGGTTTCGAGGTCATATTCTAACTTGTTAGATCTTACTTCATGTGGTTCCCCAACTTTTGGTCGCGAGAAGAAGAGGCTTCCTCGGGTGGCAACTGTTACTGGAGTACTGTCTGAACTAGATGATGAGACCAGCAACAGTGTTGGCTCTGATGCTCCCTCCTCCATCTCTCAAGAGAGGATGATTATTGTTGGTAACCAGCTTCCATTAAAGGCACACAGAAAAGACAATGGTACGTGGGACTTCACCTGGGATGAGGACTCACTTCTTTTACAGCTGAAAGATGGTCTTGGGGATGATGTGGAAACTATCTATATTGGTTGTCTTAAAGAGGAAATTGAGCCAAGTGAGCAAGATGATGTTGCTCAGTTTTTGCTTGACACTTTCAAATGTGTACCCACGTTCCTACCTCCCGAGCTTTTTAGTAAATTCTATCTTGGATTCTGCAAACAACATCTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCTGATCTTGGCGGTCGATTCGATAGGTCCCTTTGGCAAGCTTATGTGTCTGTGAACAAGATATTTGCGGATAAAGTGATGGAAGTTATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTTCCAACATTTTTGAGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCATAGTCCATTCCCTTCGTCTGAGATATACCGAACCCTTCCTGTTAGGGATGAACTTCTTAGACGGGGCTATATTGGTCTTGAGTACTATGGAAGAACTGTAAGCATTAAGATTCTTCCTGTTGGTATTCATATAGGTCAGCTTCAATCAGTCATGAATCTTCTTGAGACGGAAAGCAAGGTTGCAGAGTTACGAAACCATTTCAGAGGTCAAACTGTGATGCTTGGGGTCGATGACATGGATATATTCAAAGGAATCAGCTTAAAACTTTTGGCCATGGAACAATTGCTTTCACAACATCCTGATAAGAGGGGCAAAGTTGTTCTGATCCAAATTGCAAACCCTGCAAGAGGCCGGGGAAAAGATGTACAGGAGGTACAGAGTGAAACTTATGCCACAGTGAAAAGGATAAATGATACATTTGGAAGGTCTGGTTACACACCTGTAATCTTGATTGATACACCACTTCAGAGTTATGAGCGAATTGCTTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCCTATGAATATATCATTTGTAGACAAGGAAGTGAGAAGATAGATGAGATTTTAGGGATAAACCCATTTACCCAAAAGAAGAGCATGTTGGTGGTGTCTGAGTTCATTGGATGCTCCCCATCATTAAGTGGGGCAATTCGAGTGAATCCATGGAATATTGATGCTGTTGCTGAAGCTATGGAATCTGCACTGATAGTCCCAGAGTCTGAAAAACAGATGCGGCATGAAAAGCACTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAGAGATCATCTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGGTTTCGAGTAATCGCTCTGGATCCAAACTTTAGAAAGCTATCTGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCATAGGGCAATTCTCTTGGATTATGATGGTACTATGGTGCAGCCCGGATCAATTAGTACAACACCTAATGCTGAAGCTGTTGGAATCTTAAACAGCTTGTGCAGGGACACCAATAATTGTGTTTTCATTGTAAGTGGAAAGGAGAGAAAGACTCTTAATGAATGGTTTTCTTCTTGTGAAAGACTGGGAATCGCCGCAGAGCATGGTTATTTTGTGAGGACAAGTTATAATGCAGAATGGGAAGCTTGTGTTTCTGTGCCTGATTTTGACTGGAAACAGATTGCTGAGCCAGTTATGCAGTTATATATGGAAACAACTGATGGTTCTAACATAGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTATGAGTATGCAGACCGAGATTTTGGTTCATGTCAGGCTAAGGAGCTTTTTGATCATCTGGAAAGTGTTCTTACCAATGAACCTGTTTCTGTTAAAAGCGGTCCAAACATTGTGGAAGTTAAACCTCAGGGTGTGAGTAAGGGTATTGTAGCAGAACGTCTTCTCTTAACAAAGAAACAAAAGGGAGTGATTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCGGATGAGGACATGTTTGAGGTAATAATGAGTGCAAGGGCCTCACTATCCCCAGTTGCTGATGTGTTTCCTTGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTATTATTTGGAAGACACGACTGAGATTTTGAGAATGTTGCAAGGCCTTGCCAATGCTTCTGAGCAGCCTGCTGGAAGTTCGTCCCACTCTTCTCATTAA 2457 0.4221 MVSRSYSNLLDLTSCGSPTFGREKKRLPRVATVTGVLSELDDETSNSVGSDAPSSISQERMIIVGNQLPLKAHRKDNGTWDFTWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQFLLDTFKCVPTFLPPELFSKFYLGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLLETESKVAELRNHFRGQTVMLGVDDMDIFKGISLKLLAMEQLLSQHPDKRGKVVLIQIANPARGRGKDVQEVQSETYATVKRINDTFGRSGYTPVILIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSEKIDEILGINPFTQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMESALIVPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSISTTPNAEAVGILNSLCRDTNNCVFIVSGKERKTLNEWFSSCERLGIAAEHGYFVRTSYNAEWEACVSVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEYADRDFGSCQAKELFDHLESVLTNEPVSVKSGPNIVEVKPQGVSKGIVAERLLLTKKQKGVIPDFVLCIGDDRSDEDMFEVIMSARASLSPVADVFPCTVGQKPSKAKYYLEDTTEILRMLQGLANASEQPAGSSSHSSH 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1536g00002 818 FunFam Trehalose-6-phosphate synthase 2 640 719 - -
Gabi1536g00002 818 Gene3D - 556 673 IPR023214 -
Gabi1536g00002 818 Gene3D - 682 817 IPR023214 -
Gabi1536g00002 818 SUPERFAMILY HAD-like 557 803 IPR036412 -
Gabi1536g00002 818 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 556 673 - -
Gabi1536g00002 818 Pfam Trehalose-phosphatase 560 792 IPR003337 GO:0003824|GO:0005992
Gabi1536g00002 818 FunFam Trehalose-6-phosphate synthase 8 55 250 - -
Gabi1536g00002 818 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 250 804 IPR001830 GO:0003824|GO:0005992
Gabi1536g00002 818 CDD GT20_TPS 60 510 IPR001830 GO:0003824|GO:0005992
Gabi1536g00002 818 NCBIfam HAD-IIB family hydrolase 559 761 IPR006379 -
Gabi1536g00002 818 CDD HAD_TPP 558 792 - -
Gabi1536g00002 818 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 686 815 - -
Gabi1536g00002 818 FunFam Alpha,alpha-trehalose-phosphate synthase 279 494 - -
Gabi1536g00002 818 Gene3D Glycogen Phosphorylase B; 50 252 - -
Gabi1536g00002 818 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 514 - -
Gabi1536g00002 818 NCBIfam trehalose-phosphatase 555 803 IPR003337 GO:0003824|GO:0005992
Gabi1536g00002 818 Gene3D Glycogen Phosphorylase B; 274 494 - -
Gabi1536g00002 818 Pfam Glycosyltransferase family 20 254 510 IPR001830 GO:0003824|GO:0005992
Gabi1536g00002 818 Pfam Glycosyltransferase family 20 60 249 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1536g00002 Gabi-Chr1536 13772 17227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1536g00002 1 803 Trehalose Biosynthesis Gene Families AT4G17770 75.119 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1536g00002 K16055 - gmx:100782799 1515.75