Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1535g00003 ATGAGTGCCGAAAATAATATTGGCAGATTACGCTTGTTGTTTACTAATGCAAAACCATACCTGTTAATGATTGGCTTGCAATTTGGCATGGCTGGCAATTACATCTTGGGCAAGGATATTCTTAATCATGGGATGAGTCGTTTTGTATTCCTTGTCTACCGCAATGCCATGGCCACAATTGTCCTTGCCCCTTTCGCATTCTTTGTTGAAAGGAAAAGTAGGCCCAAGATGACACTTCCAGTCTTTCTACAAATAATGGTCCTAGGATTTCTGGAGCCAGTTTTTAATCAAAGCTTCAGTTACTTGGGGATGAAGTACACTTCGGCTTCATTCACATCTGCTATTACGAATTCTGTTCCCTCTATCACCTTTCTGCTTGCAGTCGTTATCCGGTTGGAGCTTCTAAAATTTAAGGAGGTTCGAAGTCAAGCCAAAGTGATTGGAACATTAGTAACTTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCTGGAAGCACAACCCATCATGAAGATGGAAGCCACTCCTCCCACCAAACCACTGGAGCTGTTTATATACTATTGGGTTGTGTAGCTTTGTCTTCTTTCTACATTTTGCAGTCCATAACGGTAAAAAGATACCCAGCGGAGCTATCATTGGCGACCTTGATATGCCTTGCGGGAACAGCGCAAGGTACTGCAGTGGCACTTGTGGCCGAGCGTCACTCCCGGGCTTGGGCCATTGGTTGGGATTATAGGCTCTATGCTCCTCTTTACGCGGGAATAGTTAGTTCAGGAATTGCATACTACGTTCAAGGGATGGTGATGAAAACAAGAGGCCCCGTATTTACAACGGCCTTTAACCCTCTCTGTATGATCATTGTTGCTGGTTTGGGATCGCTTATATTAGGAGAACAAATCCATCTTGGAAGTATCATTGGAGGCATTATCATCGCACTGGGCCTTTACTCGGTTGTGTGGGGCAAAGCAAAGGACTATTCAGACCCATCAGCAGCTGCAGGGGACACGAAATCACTGCCAATTACTGCAACTGATGATTCCAAAGTTGATATTTCTGACTATTTCGAAAACCAGCAATCAGCCAAGCAGAAATTAGAGGAGCCCAACAAAGTGGAGAAAGAAACAGAGTTGTATATTGTGAAGGTTTAA 1173 0.4365 MSAENNIGRLRLLFTNAKPYLLMIGLQFGMAGNYILGKDILNHGMSRFVFLVYRNAMATIVLAPFAFFVERKSRPKMTLPVFLQIMVLGFLEPVFNQSFSYLGMKYTSASFTSAITNSVPSITFLLAVVIRLELLKFKEVRSQAKVIGTLVTFGGALLMAIYKGPGFNLFHSGSTTHHEDGSHSSHQTTGAVYILLGCVALSSFYILQSITVKRYPAELSLATLICLAGTAQGTAVALVAERHSRAWAIGWDYRLYAPLYAGIVSSGIAYYVQGMVMKTRGPVFTTAFNPLCMIIVAGLGSLILGEQIHLGSIIGGIIIALGLYSVVWGKAKDYSDPSAAAGDTKSLPITATDDSKVDISDYFENQQSAKQKLEEPNKVEKETELYIVKV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1535g00003 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Gabi1535g00003 390 PANTHER WAT1-RELATED PROTEIN 18 334 IPR030184 GO:0016020|GO:0022857
Gabi1535g00003 390 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi1535g00003 390 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Gabi1535g00003 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1535g00003 Gabi-Chr1535 64797 69605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1535g00003 11 371 Nodulin-like Gene Family AT2G37460 49.194 6.82e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1535g00003 - - gmx:100786326 621.313