Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1535g00002 ATGGAAGAAAAATGGGGTGCTAGTTTTGGAAAGCAATTCAATAAGGCAAAGCCTTATTTGTTAGCGGTGGGACTGCAGTTTGGGTTTGCAGGAGCATACGTCTTCTCCATGGCCAGTCTCAACCATGGAATGAATCGTTATGTGTTCGTTGTCTATCGCAATGTCATTGCTGCAATTGCCCTCGCCCCTTTTGCATTCATTTTTGAAAGGAAAATTAGACCAAAGATGACGGCCTCTGTCTTTATACAGATAATGGTGCTCGGATTTTTGGAGCCAGTGATAGACCAAGGGTTCACTTTTTTGGGAATGCAATATACCTCGGCTTCATTTGCGTCTGCTTTGGTGAATGCCGTGCCTTCTATCACCTTTATACTAGCGTTAATTTTCAGGTTAGAGCGTGTAAATATTAAGGATGTACGGAGCCTAGCGAAGGTGATGGGGACGTTGGTAACCTTTGCAGGCGCTTCCTTGATGACACTTTACAAAGGCCCTGAACTCAACATATTTAATTATTCTTCAAACACAACACATCACCAAGATGGAAGTCACTCCCCTCAGAGTCTCAAACACTTGGTCGCAGGGATTCTCTTTCTACTCCTGGGTTGTGTGGCTTGGTCGTCTTTCTTCATTTTACAGTCCATGACGTTGAAAAGGTATCCGGCAGAATTGTCACTCTCAACTTTGATATGCGTAGTGGGTGCTTTGCAAGCCGGGGTAGTTGCGCTGGTGGCTAATCATAATTCTGGGCTTGGGGTATGGGTCATCGGTTGGGACTTTAAGCTCTTTGGTCCTCTCTACACGGGAATAGTTTCCTCGGGAATTGCGTATTATGTGCAAGGGTTGGTATTGCAAAGCAAAGGCCCAGTATTTTTAACAGCGTTTAATCCCCTTTGCATGATCATCGTTTCTATTTTAGGTCCCTTCCTTTTCGCAGAGCATCTTCACTTGGGCAGTATCGTTGGAGCCATGATTATCGCAGTGGGTCTCTACTCTGTGGTGTGGGGTAAAGGCAAAGACTATTCAGAGCCCAAGACACCATCAGCTACAAAAGAGCAAACAGAGATACAGCAGCTGCCAATTACCTCATCTGATATCTAA 1098 0.449 MEEKWGASFGKQFNKAKPYLLAVGLQFGFAGAYVFSMASLNHGMNRYVFVVYRNVIAAIALAPFAFIFERKIRPKMTASVFIQIMVLGFLEPVIDQGFTFLGMQYTSASFASALVNAVPSITFILALIFRLERVNIKDVRSLAKVMGTLVTFAGASLMTLYKGPELNIFNYSSNTTHHQDGSHSPQSLKHLVAGILFLLLGCVAWSSFFILQSMTLKRYPAELSLSTLICVVGALQAGVVALVANHNSGLGVWVIGWDFKLFGPLYTGIVSSGIAYYVQGLVLQSKGPVFLTAFNPLCMIIVSILGPFLFAEHLHLGSIVGAMIIAVGLYSVVWGKGKDYSEPKTPSATKEQTEIQQLPITSSDI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1535g00002 365 MobiDBLite consensus disorder prediction 346 365 - -
Gabi1535g00002 365 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Gabi1535g00002 365 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Gabi1535g00002 365 PANTHER WAT1-RELATED PROTEIN 17 340 IPR030184 GO:0016020|GO:0022857
Gabi1535g00002 365 MobiDBLite consensus disorder prediction 340 365 - -
Gabi1535g00002 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 337 - -
Gabi1535g00002 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1535g00002 Gabi-Chr1535 41567 46614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1535g00002 10 364 Nodulin-like Gene Family AT4G08300 47.191 9.77e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1535g00002 - - gmx:100812537 557.37