Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1535g00001 ATGGGTGCGTGGTTCAGAAATGCAAAACCATATCTGCTATTGTTGGGAGTTCAATTTGGTTCAGCCGGAATGTTCATTTTTGCAATGGATGCTATCAACAAGGGTATGAGCCATTACATCTTCATCGTCTACCGTAATGCCATCGCAGCTATAACTCTCGCTCCATTCGCATTTTTTCTAGAAAGGAAAATTAGGCCCAACATGACTCCCCGGGTATTTCTAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAATGCTTCGCCCTCTTGGGGATGAAATTAACGTCGGCATCTTTCCTCTCTGCTGTGATGAACTCCGCACCTTCCATTACTTTTGTGTTGGCAGTCATTCTAAGATTGGAGCACATGAAGATTAAGGAGGTATCATGTCAGGCCAAAGTGATTGGGACCGTAGTAACTTTTGGAGGCACGTTGCTAATGGCACTCTACAAAGGTCCCGCAGTCAGTGTCGTGGGATCATCAACAAGCCATGTCGGCCAACCTGAGAATGTGAACGACCCTACAGGAAGCCACTGGGTCATAGGGACATGTTTCCTACTCATCGGTTGTGCTGGCTTTTCTGCGTTTTACATATTGCAGGCTATAACATTGAGAAAGTATCAAGCACCAATGTCCCTGGCCACATGGGTTTGCCTCATAGGTGCACTTCAAAGCTCTGTAGTAGCTCTGTTCGCGGAGCGCCACAACCGTCATGCTTGGTCTCTGGGTTGGGACACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACGTCAGGAGTTCAGTATTACATTCAAGGCATGGTCATAAAAGCAATGGGTCCAGTTATCGTGACTGCTTTTAATCCCCTGCGTATGATCATTGTCACGGCCCTAGCTTGCATCATTCTCTCTGAGAAACTCTACCTTGGAAGTATTATTGGAGCAATAGTAGTTGTAGCTGGACTTTATCTAGTTGTGTGGGGAAAATCTAAAGAGTACAAAGGTGGAATGCCATTGTCCCCTGCAGTGCAAGACGAACATCAGCTACCTGTCACAGCTCCCAGCAACGATAGCAGCGATATTAACAAAGCTCAATTGGTCATTCACGGTGATAGAAAATGCGATGAGGAGACCACATTATCAAAAACAGAAAGTTAG 1149 0.4569 MGAWFRNAKPYLLLLGVQFGSAGMFIFAMDAINKGMSHYIFIVYRNAIAAITLAPFAFFLERKIRPNMTPRVFLEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFVLAVILRLEHMKIKEVSCQAKVIGTVVTFGGTLLMALYKGPAVSVVGSSTSHVGQPENVNDPTGSHWVIGTCFLLIGCAGFSAFYILQAITLRKYQAPMSLATWVCLIGALQSSVVALFAERHNRHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKAMGPVIVTAFNPLRMIIVTALACIILSEKLYLGSIIGAIVVVAGLYLVVWGKSKEYKGGMPLSPAVQDEHQLPVTAPSNDSSDINKAQLVIHGDRKCDEETTLSKTES 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1535g00001 382 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Gabi1535g00001 382 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
Gabi1535g00001 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Gabi1535g00001 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 328 - -
Gabi1535g00001 382 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1535g00001 Gabi-Chr1535 25236 28408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1535g00001 6 380 Nodulin-like Gene Family AT2G37460 42.553 5.87e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1535g00001 - - gmx:102665912 597.816