Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1533g00002 ATGGAGTTGGGTCGCCAAAACATTCCCTCATCTGCAATCTTGTCCTTCTTTCTATTCTTGTTCATGGTGTTAAGCATAGTTTGGAGATCAAAAACCAAGCCTTCAAAATCCAAGTTGCCACCAGGACCCCCAAAATTGCCTCTTATAGGAAACATGCACCAGATTGGTGCAATGCCACATCAAGGCCTAGCTAAATTAGCACAGAAATATGGCCCTCTAATGCACATGAAAGTTGGTGGACTTTTCATCATAGTGGTGTCTTCCGCTGAAATTGCCAAAGAAGTAATGAAGACACATTACACCACCTTTGCAAATAGGCCTCATCTTCTTGCTGCAGATGTTATAACTTATGGTTCTAAGGGCATGAGCTTTTCCCCTTACGGAAGTTATTGGAGGAAAATGAGAAAGATTTGCATGTTTGAGCTACTAACTCCAAAGCGTGTTGAATCATTTCAATCAATTAGGGAAGAGGAGGCATCAAATCTTATCAAACAGATTTGTTTGAGTGAAGGGTCATCTATCAATCTCAGTGAGATGATCATTTCATTATCCTATGGCTTAACATCACGAATAGTGTTAGGAGGCAAGTCTGAAGATCAAGAAGCATTCATAGCTGTTATGAAGGATGTCTCAAAAGTAGTTGCTGGTTTCTCCATTGCTGACTTGTACCCTTCCATTCAAATGCTGCAAGGTTTGACAGGAATAAGGTCCAAAGCTGAGAGGCTTCATCAAGAAATAGATAGGATCCTTGAGAAAATTGTCAGAGATCACAGGGACACAAGTTCAGAAACAAAGGCAATTAATGTAAAAGCAGGTGAAGATCTAGTTGATGTCCTGTTAAGGCTTCAGAGGCAGAACAACCTTGAGCAATCTCTATCTGACAGTGATATCAAAGCAACCGTTTTGGATATGTTTGGTGCTGGAAGCGTTACTTCAGCAAAAACCATAGAGTGGGCAATGTCTGAACTTGTCAAAAACCCAAGGGTGATGGAAAGAGCACAAGCTGAAATAAGAAGGGTCTTTGATGGGGAAGGGCATGTAGATGAAGCTAAACTCCATGAACTTAAATACTTAAAGTCAGTCATCAAAGAAACCTTGCGTCTACATATTCCTGTTCCATTACTACCAAGGGAATGCAGTGAGAGATGTGAAATCAATGGTTATGAGATACCAGCTAAGAGTAAGGTCATTGTTAATGCTTGGGCAATTGCTAGGGATCCAAGCTATTGGATTGAAGCTGAGAAGTTCTATCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGCAGATCTTCAATTTATTCCATTTGGTGCTGGAAGGAGGATTTGTCCTGGCATTACATTTGGTATTGCTAATGTTGAACTCTTGCTAGCAAATTTGCTTTTCCATTTTGATTGGAAGATTCCTAATGGGAATAAGCCTGAAGAACTTGACATGACTGAGTCTTTTGGCTTGTCCGTGATTAGAAAACATGACCTGTACTTGATTCCTATTGTGTATCACTCATCTGCTACATTTTGGGTAAACCTGAAATCATCCTGCAGGCTGAGCCGCCAACAATATTGTGCAGATGGTTAA 1584 0.4053 MELGRQNIPSSAILSFFLFLFMVLSIVWRSKTKPSKSKLPPGPPKLPLIGNMHQIGAMPHQGLAKLAQKYGPLMHMKVGGLFIIVVSSAEIAKEVMKTHYTTFANRPHLLAADVITYGSKGMSFSPYGSYWRKMRKICMFELLTPKRVESFQSIREEEASNLIKQICLSEGSSINLSEMIISLSYGLTSRIVLGGKSEDQEAFIAVMKDVSKVVAGFSIADLYPSIQMLQGLTGIRSKAERLHQEIDRILEKIVRDHRDTSSETKAINVKAGEDLVDVLLRLQRQNNLEQSLSDSDIKATVLDMFGAGSVTSAKTIEWAMSELVKNPRVMERAQAEIRRVFDGEGHVDEAKLHELKYLKSVIKETLRLHIPVPLLPRECSERCEINGYEIPAKSKVIVNAWAIARDPSYWIEAEKFYPERFLDSSVDYKGADLQFIPFGAGRRICPGITFGIANVELLLANLLFHFDWKIPNGNKPEELDMTESFGLSVIRKHDLYLIPIVYHSSATFWVNLKSSCRLSRQQYCADG 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1533g00002 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi1533g00002 527 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 Coils Coil 232 252 - -
Gabi1533g00002 527 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 CDD CYP71-like 69 495 - -
Gabi1533g00002 527 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 Gene3D Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 PANTHER OS08G0105600 PROTEIN 64 503 - -
Gabi1533g00002 527 Pfam Cytochrome P450 40 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1533g00002 527 FunFam Cytochrome P450 71D8 32 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1533g00002 Gabi-Chr1533 18140 20161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1533g00002 31 498 Cytochrome P450 AT3G48310 39.787 2.81e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1533g00002 - - gmx:100818000 767.303