Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1525g00009 ATGAAGAGTTGTGATGAATGGAAACCTTTTCTTGTAATGATAGCAATTGATTTTTCTTTAACCATAGTAAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGGACCATTTGGTTCTTATCACATATCGTCTGTTAATTTCTACTATTTTCTTAGTCCCACTCAGCTACTTTTGGGAAAGAAATGGAAGACCACGTCTCACATTCCGAATTTCATGTTTCCTTTTCTTCAGTGCCATTGTTGGGGCATCGGTCACACAATACTTATTCCTTCTAGGGATCCAATACACCTCAGCTACCTTTGCTTGTGCCTTTGTCAATATGGTGCCTGTGATCACATTCATTATGGCATTACCATTTGGATTAGAGACTGTGAACATCAAATGCAACAGTGGCAAAGCGAAGATTCTTGGTGCATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAGGGAAAGCCCTTGTTTGATTATTCTAACTATCAATCTGTAGCTCCAGAAGCCATGAGATCTACAATGAAGCAAGATTCTACTACTAGAATGACAGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTAGGAACCAGCTTTTGGTCTTCTTGGTTTATTTTGCAATCAAATATAGGAAAGAGATACCCATGCCAATATTCTAGCACTGCCATCATGACCTTCTTTGGAGCCATTCAATCAGCTATTCTTGGCTTGTCCACTGGCAGGAACTTGTCCAAGTGGGTTCTCAAGGGAAAGATACAAATAATCACTGTTCTATATTCTGGGATGGTTGGATCAGGTTTCTGCTATGTGGGCATGTCATGGTGTGTCAAGAAAAGGGGTCCAGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCCATGATTGATATCCCGGTCTTGCATGAACAGCTCCATCTTGGAAGCGTGATGGGATCTATGTTGGTCATGATCGGATTATACATTCTTCTATGGGGTAAGAGCAAGAGATGCAAAGCCCTCCAAGAAGTTGATGAAGTAAAGGAACAAGAGCCGCAAATACAACATACTGCCGTCTCCTGTGATTCACAGTCTCACTGA 1089 0.4105 MKSCDEWKPFLVMIAIDFSLTIVNILLKKVLEEGMDHLVLITYRLLISTIFLVPLSYFWERNGRPRLTFRISCFLFFSAIVGASVTQYLFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCNSGKAKILGAFVCIGGALLLTLYKGKPLFDYSNYQSVAPEAMRSTMKQDSTTRMTEKWTIGVIALILGTSFWSSWFILQSNIGKRYPCQYSSTAIMTFFGAIQSAILGLSTGRNLSKWVLKGKIQIITVLYSGMVGSGFCYVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSMLVMIGLYILLWGKSKRCKALQEVDEVKEQEPQIQHTAVSCDSQSH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1525g00009 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Gabi1525g00009 362 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi1525g00009 362 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020
Gabi1525g00009 362 PANTHER WAT1-RELATED PROTEIN 8 334 IPR030184 GO:0016020|GO:0022857
Gabi1525g00009 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1525g00009 Gabi-Chr1525 78573 80383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1525g00009 7 261 Nodulin-like Gene Family AT3G30340 50.391 1.12e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1525g00009 - - qsa:O6P43_012803 572.778