Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1521g00010 ATGCCAGGGAACAATTATAACTGCACTCCTTTAACACCAAGATCTAGATTGGAAAGGCTTTTGAGGGAAAGAGAGCTAAGGAAATCCTCAAGGAATTCTCAACCGACCGATGAGGCAAGAGATGGCAACAAAGAGGCAGAACAGTTTTATAGTGATTCATTCATAAGTGAGAATGAAATTTCGGGTACTAATAATGAGGAAGAGGTCTCGGAAGTTCTTACAGATAGAAGTCAAAGGCAAGATGAGCGGCCATACAAACAACGTTTGTTGGTGGTAGCAAACAGGTTGCCTGTCTCTGCTGTTAGGGAGGGTGTGGACTCATATCACCTTGAGATCAGTGTAGGCGGGCTAGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACCAGATGGATTGGGTGGGCTGGCGTGAATGTGCCTGATGATATTGGGCAGAAAGCATTGACTAAAGCTTTAGCTGAAATGCGATGTATCCCAGTGTTTCTTGATGAGGAGATAGTTAATCAGTACTATAATGGTTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTGGGGCTTCCGCAAGAAGACCGACTTGCTACCACCCGTAGTTTCCAATCACAGTTCGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTGAATAAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTGATGTTCCTTCCAAAATGTTTAAAAGAGTACAATGACAAAATGAAAGTTGGCTGGTTTCTCCATACACCTTTTCCTTCCTCAGAAATACATAGGACTCTGCCATCCAGATCAGAGCTGTTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTCCATACATACGATTATGCTAGGCATTTTGTTAGTGCTTGTACTCGTATTCTTGGGCTGGAGGGTACACCTGAAGGAGTGGAAGATCAAGGGAGGCTAACCCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGAGAGATTTATTCGAGCCCTTGAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATAAAAGGAATTCCCCAGAAAATCTTGGCATTTGAGAAGTTCCTCGAGGAGAATTCACACTGGCGTGATAAAGTTGTCTTGCTGCAAATTGCTGTACCTACTAGGACAGATGTTCCTGAATATCAAAAGCTTACGAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACTGCTGTCCCAATACACCATCTGGACCGGTCACTTGACTTTCAAGCATTATGTGCACTCTATGCTGTCACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCATGTCAAGCTTCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCAATCTTGGTAAACCCATGGAACATCACAGAGGTTGCTGCTTCTATCGGTTATGCTTTAGATATGCCAGCGGATGAAAGAGAAAAACGGCATCAGGTTAATTTCAAGCATGTGACAACTCACACGTCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTCGGACAAGACAAGTTCCTCCATTACTTCCCAACAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGATTAATTATACTGGGTTTCAATGCCACTTTGACTGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAAAGAACTGGAACTTACATTGCACCCAAATTTGAAGGAACCTTTAAAGAAGTTATCTGATGATCCGAAGACAACAATAGTTGTTCTGAGTGGAAGTGATCGAGCTGTCCTGGACAATAACTTCAGTGAATACAATATGTGGTTGGCAGCAGAAAATGGGATGTTTTTGCGACTTACTTCAGGTGAATGGATGACAACCTTGCCTGAAAATTTAAACATGGATTGGGTCGATAGTGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACACCACGGTCTCATTTTGAGCTTCGTGAAACTTCAGTTATATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGGCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTCCGGGCAGTTGGTGTGTCGAAGGGAGCAGCTATTGATCGTATCCTGGGAGAGATAGTTCATAACAAAGGCATGAAGGCACCAATTGATTATGTCCTATGCATTGGACACTTTCTAGCAAAGGATGAAGATGTCTACAAATTTTTCGAGCCAGAGCTTCCTTCTGAATCATCTTCAATAGCAAGAGCTATGCTATCCAATTCTTACAGGCCATCATCTCTGCCAAAATTTTCAGCCAACAAAAGTGGGTCTAAGGCATCTCGTTATAAGAAGCAACATTCATTGTCAAATATAGAAAAGAGTCAAATTGATTATGCAAGCGGTGATGCTTGGAGACCAACATATCGCGATCGAATATCACTACATGAAGGTTCTTCAGTGCTAGATCTTAAAGGTGATAACTACTTCTCTTGTGCTGTTGCACGAAAGAGATCAAGTGCACGCTATCTTCTTAAAACCTCACATGATGTTGTCAATCTTTTAAGTGACCTAGCGGATCATTCTTCATCACCATCAACTTGA 2781 0.4232 MPGNNYNCTPLTPRSRLERLLRERELRKSSRNSQPTDEARDGNKEAEQFYSDSFISENEISGTNNEEEVSEVLTDRSQRQDERPYKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGVKEFDTRWIGWAGVNVPDDIGQKALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFQALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQVNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIKELELTLHPNLKEPLKKLSDDPKTTIVVLSGSDRAVLDNNFSEYNMWLAAENGMFLRLTSGEWMTTLPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSVIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPSESSSIARAMLSNSYRPSSLPKFSANKSGSKASRYKKQHSLSNIEKSQIDYASGDAWRPTYRDRISLHEGSSVLDLKGDNYFSCAVARKRSSARYLLKTSHDVVNLLSDLADHSSSPST 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1521g00010 926 FunFam Alpha,alpha-trehalose-phosphate synthase 611 681 - -
Gabi1521g00010 926 Gene3D - 677 757 - -
Gabi1521g00010 926 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 77 918 IPR001830 GO:0003824|GO:0005992
Gabi1521g00010 926 MobiDBLite consensus disorder prediction 49 68 - -
Gabi1521g00010 926 MobiDBLite consensus disorder prediction 23 80 - -
Gabi1521g00010 926 Pfam Trehalose-phosphatase 611 821 IPR003337 GO:0003824|GO:0005992
Gabi1521g00010 926 Gene3D Glycogen Phosphorylase B; 79 334 - -
Gabi1521g00010 926 Gene3D - 614 771 IPR023214 -
Gabi1521g00010 926 MobiDBLite consensus disorder prediction 23 47 - -
Gabi1521g00010 926 CDD GT20_TPS 88 553 IPR001830 GO:0003824|GO:0005992
Gabi1521g00010 926 Gene3D Glycogen Phosphorylase B; 335 537 - -
Gabi1521g00010 926 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 677 757 - -
Gabi1521g00010 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 335 537 - -
Gabi1521g00010 926 Pfam Glycosyltransferase family 20 88 553 IPR001830 GO:0003824|GO:0005992
Gabi1521g00010 926 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 88 553 IPR012766 GO:0003825|GO:0005992
Gabi1521g00010 926 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 87 556 - -
Gabi1521g00010 926 CDD HAD_TPP 586 805 - -
Gabi1521g00010 926 SUPERFAMILY HAD-like 585 773 IPR036412 -
Gabi1521g00010 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 80 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1521g00010 Gabi-Chr1521 177277 188425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1521g00010 1 924 Trehalose Biosynthesis Gene Families AT1G78580 76.096 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1521g00010 K16055 - gmx:100816642 1635.16