Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi151g00015 ATGTGTTCAACTTTCTTCTCTTCCAACTCCACTATGCTCTGCGTTCTTGCCTCCTTGTTGGGATTGTTCGGTTTTCTTGGAATGGAGCTTCCTGTCATAATGGCTGATTGCCCTTTGAATTTTACTGTTTCAAATTTTACTCTGGCATCCTCTATATGCTCACACGAAGGTGACAGGGGAAATTGTTGCCGCTACATTAATGCTAACATTGCAATTTCAGTTGCTCGTTTTGCTAATGCAACAAGCAAGCTAGGGGTCCCTCCAGATGCCTCTGACATCTGCCTCCAATCCATATATCAGACTTTACAACTTTATGGAGTTGCACAAAATGCAACAGTTTTTTGTGGTTTTGGGACAAAAATTCCTGTTAATTATGAATGCAAGGGCCGAACTAGTGTCGTGCATATGCTTCAATCTCCCAGATTTACGGAGGTCACAGAAAATTGCAAAGTGCCACTTGCAGATGAAAGTAAATGTAAGAAATGCTTAAATGCCGGCATTGTTTATCTGCATCATCTAGGAATTGAAGATAATATAACACTGAGTACTTGTCGCGATGCCACTTTTGCTGCACTAGCAAGCCAAGTTGATGAGAAATCTACTATTGACATCGCAAGTTGTTTCTTTGGGGTTCAAGGACTTCTCCGGCCTCCTGTTTCAGAGTCATCCCCATCCTTGCCTACTCCTGAGGCTTCTCCAAGTCCACATGTTGCTGATAGTCCAAGTCAACTATTGTTAGGTGTACCTTTTAAGGGAAACCATCATTCATATCACCTGACATTAGTTCCAGGTATTGCTATTGCAGTCACAGCTGTTGCTATTATGACGCTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGATGAGCCTGATAATTTTGGTAAAACCTGTTCGAAAACCTTACCTCCTTGTTCAACATGGAAATTTCAGGAAGGTTCATCAATGTTCCGAAAATTCAACTACAGGGAGATAAAGAAGGCAACAGAGGATTTTAGCACCATCATTGGCCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTAAAGCGGATGAACAGAATCTCTGAGCAGGGGGAGGATGAGTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCATCGTCATCTTGTTGCTTTAAGAGGCTTTTGCATTAAAAAGCATGAGAGGTTTCTGTTGTATGAGTACATGGGAAATGGAAGCTTAAAAGACCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGGGAGCTAGAATCCAAATTGCCATTGACGTGGCTAATGCCCTGGAATACCTTCATTTCTATTGTGATCCTCCTCTGTGTCACAGAGACATTAAGTCTAGCAACACTTTATTGGATGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATAAGCTTTGAACCTGTAAACACCGAAATCCGGGGAACTCCAGGTTATATGGATCCTGAATATGTTGTTACTCAAGAGCTCACTGAGAAAAGCGATATATACAGTTTTGGAGTGTTACTACTGGAAATTGTGACAGGAAGACGAGCTATTCAAGATAATAAGAATTTGGTAGAATGGGCCCAACCATACATGGAATCAGAAACAAGACTATTGGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAATTTCTATAGTAGGATGGTGCACCCAAAGAGAAGGAAGAGCAAGGCCTTCAATAAAACAGGTCCTCAGGCTTCTTTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCTGTTGAAGAATGTCAGGGAAATCAGCAGAGAGGCAGAAGAAGCAAAGGGAAAATGCTCAGAAACGAAGCAATTTTTAACAGCGGGGATGGAAGATATCTTGCTTCATCTTCAAGTACATCTCGTTCATATTGCAGTAGAAGCTTTTTGCTTGAGAATGGCTCTCCAGAGTCCCCGTCAAATATATTCTCAGTCTGA 2040 0.4196 MCSTFFSSNSTMLCVLASLLGLFGFLGMELPVIMADCPLNFTVSNFTLASSICSHEGDRGNCCRYINANIAISVARFANATSKLGVPPDASDICLQSIYQTLQLYGVAQNATVFCGFGTKIPVNYECKGRTSVVHMLQSPRFTEVTENCKVPLADESKCKKCLNAGIVYLHHLGIEDNITLSTCRDATFAALASQVDEKSTIDIASCFFGVQGLLRPPVSESSPSLPTPEASPSPHVADSPSQLLLGVPFKGNHHSYHLTLVPGIAIAVTAVAIMTLIVLIVLIRQKSRELDEPDNFGKTCSKTLPPCSTWKFQEGSSMFRKFNYREIKKATEDFSTIIGQGGFGTVYKAHFSDGLVAAVKRMNRISEQGEDEFCREIELLARLHHRHLVALRGFCIKKHERFLLYEYMGNGSLKDHLHSPGKTPLSWGARIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKDGSISFEPVNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLQTVISIVGWCTQREGRARPSIKQVLRLLYETSEPMHSEFLQAVEECQGNQQRGRRSKGKMLRNEAIFNSGDGRYLASSSSTSRSYCSRSFLLENGSPESPSNIFSV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi151g00015 679 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Gabi151g00015 679 Gene3D Transferase(Phosphotransferase) domain 1 409 625 - -
Gabi151g00015 679 Pfam Protein kinase domain 337 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi151g00015 679 SUPERFAMILY Protein kinase-like (PK-like) 311 604 IPR011009 -
Gabi151g00015 679 Gene3D Phosphorylase Kinase; domain 1 300 408 - -
Gabi151g00015 679 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi151g00015 679 CDD STKc_IRAK 339 601 - -
Gabi151g00015 679 PANTHER OS01G0750732 PROTEIN 180 619 - -
Gabi151g00015 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Gabi151g00015 679 MobiDBLite consensus disorder prediction 220 239 - -
Gabi151g00015 679 Pfam SPARK 36 167 IPR043891 -
Gabi151g00015 679 FunFam Putative receptor-like protein kinase 303 408 - -
Gabi151g00015 679 FunFam Putative receptor-like protein kinase 409 609 - -
Gabi151g00015 679 SMART serkin_6 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi151g00015 Gabi-Chr151 68059 73607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi151g00015 35 678 Receptor kinase-like Gene Family AT3G19300 60.957 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Gabi151g00015 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi151g00015 - - gmx:100809641 1159.05