Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi151g00014 ATGTGTTCAACTTTCTTCTCTTCCAACTCCACTATGCTCTGCGTTCTTGCCTCCTTGTTGGGATTGTTCGGTTTTCTTGGAATGGAGCTTCCTGTCATAATGGCTGATTGCCCTTTGAATTTTACTGTTTCAAATTTTACTCTGGCATCCTCTATATGCTCACACGAAGGTGACAGGGGAAATTGTTGCCGCTACATTAATGCTAACATTGCAATTTCAGTTGCTCGTTTTGCTAATGCAACAAGCAAGCTAGGGGTCCCTCCAGATGCCTCTGACATCTGCCTCCAATCCATATATCAGACTTTACAACTTTATGGAGTTGCACAAAATGCAACAGTTTTTTGTGGTTTTGGGACAAAAATTCCTGTTAATTATGAATGCAAGGGCCGAACTAGTGTCGTGCATATGCTTCAATCTCCCAGATTTACGGAGGTCACAGAAAATTGCAAAGTGCCACTTGCAGATGAAAGTAAATGTAAGAAATGCTTAAATGCCGGCATTGTTTATCTGCATCATCTAGGAATTGAAGATAATATAACACTGAGTACTTGTCGCGATGCCACTTTTGCTGCACTAGCAAGCCAAGTTGATGAGAAATCTACTATTGACATCGCAAGTTGTTTCTTTGGGGTTCAAGGACTTCTCCGGCCTCCTGAGTCATCCCCATCCTTGCCTACTCCTGAGGCTTCTCCAAGTCCACATGTTGCTGATAGTCCAAGTCAACTATTGTTAGGTGTACCTTTTAAGGGAAACCATCATTCATATCACCTGACATTAGTTCCAGGTATTGCTATTGCAGTCACAGCTGTTGCTATTATGACGCTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGATGAGCCTGATAATTTTGGTAAAACCTGTTCGAAAACCTTACCTCCTTGTTCAACATGGAAATTTCAGGAAGGTTCATCAATGTTCCGAAAATTCAACTACAGGGAGATAAAGAAGGCAACAGAGGATTTTAGCACCATCATTGGCCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTAAAGCGGATGAACAGAATCTCTGAGCAGGGGGAGGATGAGTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCATCGTCATCTTGTTGCTTTAAGAGGCTTTTGCATTAAAAAGCATGAGAGGTTTCTGTTGTATGAGTACATGGGAAATGGAAGCTTAAAAGACCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGGGAGCTAGAATCCAAATTGCCATTGACGTGGCTAATGCCCTGGAATACCTTCATTTCTATTGTGATCCTCCTCTGTGTCACAGAGACATTAAGTCTAGCAACACTTTATTGGATGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATAAGCTTTGAACCTGTAAACACCGAAATCCGGGGAACTCCAGGTTATATGGATCCTGAATATGTTGTTACTCAAGAGCTCACTGAGAAAAGCGATATATACAGTTTTGGAGTGTTACTACTGGAAATTGTGACAGGAAGACGAGCTATTCAAGATAATAAGAATTTGGTAGAATGGGCCCAACCATACATGGAATCAGAAACAAGACTATTGGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAATTTCTATAGTAGGATGGTGCACCCAAAGAGAAGGAAGAGCAAGGCCTTCAATAAAACAGGTCCTCAGGCTTCTTTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCTGTTGAAGAATGTCAGGGAAATCAGCAGAGAGGCAGAAGAAGCAAAGGGAAAATGCTCAGAAACGAAGCAATTTTTAACAGCGGGGATGGAAGATATCTTGCTTCATCTTCAAGTACATCTCGTTCATATTGCAGTAGAAGCTTTTTGCTTGAGAATGGCTCTCCAGAGTCCCCGTCAAATATATTCTCAGTCTGA 2034 0.4199 MCSTFFSSNSTMLCVLASLLGLFGFLGMELPVIMADCPLNFTVSNFTLASSICSHEGDRGNCCRYINANIAISVARFANATSKLGVPPDASDICLQSIYQTLQLYGVAQNATVFCGFGTKIPVNYECKGRTSVVHMLQSPRFTEVTENCKVPLADESKCKKCLNAGIVYLHHLGIEDNITLSTCRDATFAALASQVDEKSTIDIASCFFGVQGLLRPPESSPSLPTPEASPSPHVADSPSQLLLGVPFKGNHHSYHLTLVPGIAIAVTAVAIMTLIVLIVLIRQKSRELDEPDNFGKTCSKTLPPCSTWKFQEGSSMFRKFNYREIKKATEDFSTIIGQGGFGTVYKAHFSDGLVAAVKRMNRISEQGEDEFCREIELLARLHHRHLVALRGFCIKKHERFLLYEYMGNGSLKDHLHSPGKTPLSWGARIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKDGSISFEPVNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLQTVISIVGWCTQREGRARPSIKQVLRLLYETSEPMHSEFLQAVEECQGNQQRGRRSKGKMLRNEAIFNSGDGRYLASSSSTSRSYCSRSFLLENGSPESPSNIFSV 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi151g00014 677 FunFam Putative receptor-like protein kinase 301 406 - -
Gabi151g00014 677 FunFam Putative receptor-like protein kinase 407 607 - -
Gabi151g00014 677 CDD STKc_IRAK 337 599 - -
Gabi151g00014 677 PANTHER OS01G0750732 PROTEIN 180 617 - -
Gabi151g00014 677 Gene3D Transferase(Phosphotransferase) domain 1 407 623 - -
Gabi151g00014 677 SMART serkin_6 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi151g00014 677 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi151g00014 677 ProSiteProfiles Protein kinase domain profile. 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi151g00014 677 SUPERFAMILY Protein kinase-like (PK-like) 309 602 IPR011009 -
Gabi151g00014 677 Gene3D Phosphorylase Kinase; domain 1 298 406 - -
Gabi151g00014 677 MobiDBLite consensus disorder prediction 218 237 - -
Gabi151g00014 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Gabi151g00014 677 Pfam SPARK 36 167 IPR043891 -
Gabi151g00014 677 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi151g00014 Gabi-Chr151 68059 73607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi151g00014 35 676 Receptor kinase-like Gene Family AT3G19300 62.074 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Gabi151g00014 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi151g00014 - - gmx:100809641 1137.48