Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi151g00001 ATGAACTTTAGGAACTACGTTGATAACTCTACTTGGGATGTCATGGGTGGGAAACCACAGGCAAATGTTAATCTGGTGAGACAGCCCTCAATATACTCCCTGACTTTTGATGAGTTCCAGAACACCATGGGTGGGATTGGAAAGGATTTTGGATCTATGAACATGGATGAACTCTTGAAGAACATATGGACAGCTGAAGAGACTCAGGCCTTGGCATCTTCAGCTGGTGGAGAAGAAAGTGGTCATAACCCAAGTGGTAATTTGCAAAGACAAGGTTCTTTAACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTATGGAGGGATTTGATCAAAGACACTGGTGGATCTAGAGATGGGAGTGGCAATGGTGGTTCATCTATGCCTCAAAGGCAACCAACATTAGGAGAAATGACTTTGGAGGATTTTTTGGTGAGAGCTGGGGTTGTGAGAGAAGATATGACTGAACAAATTGGAAGACCAACAAATAATAATGGATGGTTTGGTGACTTTTCTAGATCAAACAATAACACTGATCTACTTATTGGGTTTCAACAACCAAATCGAAGTAATGGGAATTTGGGTAACAGGATGGTGGATGGCAATAACTTAGTTCCTAAACACCCTCCTCCTTTATCATTAAACTCAAACCACTCTCAGCCACAAACACAACAGCACCAGCAGCAGCCACTGCTTTTCCCAAAACCAACAAATGTAGCTTTTGCTTCTCCTATGCATTTGTTAAACAATGCTCAGCTTGCTAGCCCTGGAAGAAGGGGAGGGATGATTGGAGTTCCGGAGCATTCAATGAATGGTACATTAACAGGTGTTGGAATGGTAGGTTTATCCACAGCCAATGTCACAGCTCCAAATGGTTCTCCAGCAAATAAAATATCAGAGGATGTTATTACAAAAAGTAGCGTAGATACTTCTTCACTATCACCAGTTCCTTATGTAATCAACAGGGGAAGGAAGTGCAGTGCTGTAGAGAAAGTCGTTGAGAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCGAGGTCACGGGCTCGCAAGCAGGCCTACACTTTCGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACCAAGAATTACAGAGAAAACAGGCAGAAATTATGGAAACGCAGAAAAATAAGGATTCGGACTCTGTGTCCCGGCCATGGGGAAATAAAAGAAGATGCTTGAGAAGGACACTTACAGGTCCCTGGTAG 1248 0.4255 MNFRNYVDNSTWDVMGGKPQANVNLVRQPSIYSLTFDEFQNTMGGIGKDFGSMNMDELLKNIWTAEETQALASSAGGEESGHNPSGNLQRQGSLTLPRTLSQKTVDEVWRDLIKDTGGSRDGSGNGGSSMPQRQPTLGEMTLEDFLVRAGVVREDMTEQIGRPTNNNGWFGDFSRSNNNTDLLIGFQQPNRSNGNLGNRMVDGNNLVPKHPPPLSLNSNHSQPQTQQHQQQPLLFPKPTNVAFASPMHLLNNAQLASPGRRGGMIGVPEHSMNGTLTGVGMVGLSTANVTAPNGSPANKISEDVITKSSVDTSSLSPVPYVINRGRKCSAVEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEVNQELQRKQAEIMETQKNKDSDSVSRPWGNKRRCLRRTLTGPW 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi151g00001 415 CDD bZIP_plant_BZIP46 337 391 - -
Gabi151g00001 415 MobiDBLite consensus disorder prediction 381 401 - -
Gabi151g00001 415 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 335 392 - -
Gabi151g00001 415 MobiDBLite consensus disorder prediction 381 403 - -
Gabi151g00001 415 MobiDBLite consensus disorder prediction 188 231 - -
Gabi151g00001 415 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 415 IPR043452 GO:0003700|GO:0045893
Gabi151g00001 415 MobiDBLite consensus disorder prediction 211 231 - -
Gabi151g00001 415 SMART brlzneu 333 397 IPR004827 GO:0003700|GO:0006355
Gabi151g00001 415 MobiDBLite consensus disorder prediction 114 139 - -
Gabi151g00001 415 SUPERFAMILY Leucine zipper domain 337 385 IPR046347 GO:0003700|GO:0006355
Gabi151g00001 415 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 335 386 IPR004827 GO:0003700|GO:0006355
Gabi151g00001 415 Coils Coil 360 390 - -
Gabi151g00001 415 Pfam bZIP transcription factor 337 390 IPR004827 GO:0003700|GO:0006355
Gabi151g00001 415 MobiDBLite consensus disorder prediction 121 136 - -
Gabi151g00001 415 Gene3D - 335 392 - -
Gabi151g00001 415 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 340 355 IPR004827 GO:0003700|GO:0006355
Gabi151g00001 415 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi151g00001 Gabi-Chr151 20155 23414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi151g00001 1 415 bZIP Transcription Factor Family AT4G34000 45.868 1.17e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi151g00001 bZIP_1 7.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi151g00001 K14432 - gmx:100776600 558.91