Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1506g00014 ATGCTCGTAGAGACGACTCCGTCGTTGACGACTTTCACGGCGCTTGAAAATCCTGATGCTGAAGAAGTGAAAGAGTTCGTGCAGGAACAGGTTCGGTTAACGGATTCGGTTTTGCAGAAATGCGATATTCGGGGTAAGCTTCGTGAGACAATTACGAAACTGTTTGATCATCCTCGTTATGAAGTTCCTTTCAGGCGAGGTAATAAGTACTTTTACTTCCACAACACTGGCCTTCAGCCCCAGAGTGTTCTTTATGTGCAGGATAGTTTGGAGGGTGAAGCAGAGGTTTTGCTTGATCCCAATGCCCTCAGTGAAGATGGTACTGTCTCACTCAACACGCTATCTGTAAGCAAAGATGCTAAGTTCTTGGCTTATGGACTTAGTTCCAGTGGTAGCGATTGGGTCACGATTAAAGTGATGTGTGTTGAGGACAAGAATGTTGAGCCTGATACATTGTCTTGGGTCAAGTTTTCCTCTATTAGTTGGACTCATGATAGCAAAGGTTTCTTTTACAGCCGCTATCCAGCCCCTAGGGATGGAGATGTAGTAGATGCTGGGACTGAGACAAATGCAAACCTTCGTCATGAGCTCTATTATCATTTTTTGGGTACAGATCAATCGGAAGATATTCTGTGCTGGAGAGATCCTGATAACCCTAAATATTTGTTTGGAGGAAGTGTTACCAATGACGGGAAGTATGTTCTTCTCTATATTGACGAAGGGTGTGATCCAGTTAACAAGCTTTACTACTGTGACTTGTCTGAACTTCCCAGTGGACTGGAAGGTTTTCGGAATGAAAACTCCCTCCTCCCATTTGTCAAGCTTATTGATAAATTTGATGCACAGTATCATGCTGTTGCAAATGATGACACCGTGTTTACATTTTTAACCAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAAGAACCAAATGCTTGGACTGATGTTATCCAAGAGTCTGAAAAAGATGTGCTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATTGTGAGGTACTTGAGTGATGTGAAGTATGTTGTGCAAGTAAGGGACTTAGAAACAGGTTCATTGCAGCATCAATTACCAATTGACATTGGCACAGTTTATGGAATTTCTGCACGGCGTGAAGATACTGTGGTTTTCATTGGCTTTACAAGTTTTTTGACTCCTGGTATCATATATCTGTGCGACCTGGGAACACAGATTCCTGATATGAAGATATTTCGAGAAATTGTGGTCCCTGGATTTGATCGCTCTGGCTTTCATGTCAATCAGGTTTTTGCGCCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAGAAAGGATATTATATTGGATGGTTCACACCCTTGTTTGTTATATGCATATGGTGGTTTTAACATCAATCTTACACCATATTTCAGCGTCAGTCGCATTGTACTTACAAGACATTTAGGTGCTGTTTTCTGCATAGCAAATATTCGTGGAGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCTCTTGCAAAAAAGCAAAACTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCTGGTTATACTCAACCCAGAAAGTTATGCATAGAAGGTGGAAGCAATGGTGGGCTTCTTGTTGGTGCTTGCATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCACGCTTGGACCTCAGATTATGGTTGTTCAGACAAGGAGGAAGAATTTCATTGGCTAATCAAGTACTCACCATTGCACAATGTCCGTAGACCTTGGGAACAGCATCCTGATAAGTCAATTCAGTACCCATCAACAATGTTGTTGACGGCTGATCATGATGATCGTGTTGTGCCCTTGCATTCTTTGAAGCTATTGGCGACCATGCAGTATGTCCTCAGTACTAGCCTAGATAAAAGTCCCCAGACGAACCCTATAATTGGTCGCATTGAATGCAAAGCTGGACATGGTGCCGGGCGTCCGACACAGAAAATGATTGATGAAGCTGCTGACCGGTACGGTTTTATGGCTAAGATGTTAGACGCCCATTGGATTGAATAG 2127 0.4255 MLVETTPSLTTFTALENPDAEEVKEFVQEQVRLTDSVLQKCDIRGKLRETITKLFDHPRYEVPFRRGNKYFYFHNTGLQPQSVLYVQDSLEGEAEVLLDPNALSEDGTVSLNTLSVSKDAKFLAYGLSSSGSDWVTIKVMCVEDKNVEPDTLSWVKFSSISWTHDSKGFFYSRYPAPRDGDVVDAGTETNANLRHELYYHFLGTDQSEDILCWRDPDNPKYLFGGSVTNDGKYVLLYIDEGCDPVNKLYYCDLSELPSGLEGFRNENSLLPFVKLIDKFDAQYHAVANDDTVFTFLTNKDAPKYKLVRVDLKEPNAWTDVIQESEKDVLESACAVNGNQLIVRYLSDVKYVVQVRDLETGSLQHQLPIDIGTVYGISARREDTVVFIGFTSFLTPGIIYLCDLGTQIPDMKIFREIVVPGFDRSGFHVNQVFAPSKDGTKIPMFIVARKDIILDGSHPCLLYAYGGFNINLTPYFSVSRIVLTRHLGAVFCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSAGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHPDKSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLSTSLDKSPQTNPIIGRIECKAGHGAGRPTQKMIDEAADRYGFMAKMLDAHWIE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1506g00014 708 SUPERFAMILY Peptidase/esterase 'gauge' domain 12 406 - -
Gabi1506g00014 708 PANTHER PROLYL ENDOPEPTIDASE 12 706 - -
Gabi1506g00014 708 Pfam Prolyl oligopeptidase family 473 703 IPR001375 GO:0006508|GO:0008236
Gabi1506g00014 708 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 15 405 IPR023302 GO:0004252
Gabi1506g00014 708 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 513 532 IPR002470 GO:0004252|GO:0006508
Gabi1506g00014 708 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 543 563 IPR002470 GO:0004252|GO:0006508
Gabi1506g00014 708 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 485 509 IPR002470 GO:0004252|GO:0006508
Gabi1506g00014 708 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 625 647 IPR002470 GO:0004252|GO:0006508
Gabi1506g00014 708 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 458 476 IPR002470 GO:0004252|GO:0006508
Gabi1506g00014 708 FunFam Prolyl endopeptidase 58 417 - -
Gabi1506g00014 708 ProSitePatterns Prolyl endopeptidase family serine active site. 520 550 IPR002471 GO:0004252|GO:0006508
Gabi1506g00014 708 Gene3D alpha/beta hydrolase 413 706 IPR029058 -
Gabi1506g00014 708 Gene3D - 58 412 - -
Gabi1506g00014 708 FunFam Prolyl endopeptidase 382 698 - -
Gabi1506g00014 708 SUPERFAMILY alpha/beta-Hydrolases 428 652 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1506g00014 Gabi-Chr1506 203891 209545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1506g00014 458 590 Carbohydrate Esterase AT5G36210 30.496 5.09e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1506g00014 K01322 - gmx:100812955 1302.35