Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1506g00013 ATGGGTTCTCTCTCTGCCTTTGACCAACCTATCCAATATCCCAATGCTCGTAGAGACGACTCCGTCGTTGACGACTTTCACGGCGTTAAGATTCCCGATCCTTACCGTTGGCTTGAAAATCCTGATGCTGAAGAAGTGAAAGAGTTCGTGCAGGAACAGGTTCGGTTAACGGATTCGGTTTTGCAGAAATGCGATATTCGGGGTAAGCTTCGTGAGACAATTACGAAACTGTTTGATCATCCTCGTTATGAAGTTCCTTTCAGGCGAGGTAATAAGTACTTTTACTTCCACAACACTGGCCTTCAGCCCCAGAGTGTTCTTTATGTGCAGGATAGTTTGGAGGGTGAAGCAGAGGTTTTGCTTGATCCCAATGCCCTCAGTGAAGATGGTACTGTCTCACTCAACACGCTATCTGTAAGCAAAGATGCTAAGTTCTTGGCTTATGGACTTAGTTCCAGTGGTAGCGATTGGGTCACGATTAAAGTGATGTGTGTTGAGGACAAGAATGTTGAGCCTGATACATTGTCTTGGGTCAAGTTTTCCTCTATTAGTTGGACTCATGATAGCAAAGGTTTCTTTTACAGCCGCTATCCAGCCCCTAGGGATGGAGATGTAGTAGATGCTGGGACTGAGACAAATGCAAACCTTCGTCATGAGCTCTATTATCATTTTTTGGGTACAGATCAATCGGAAGATATTCTGTGCTGGAGAGATCCTGATAACCCTAAATATTTGTTTGGAGGAAGTGTTACCAATGACGGGAAGTATGTTCTTCTCTATATTGACGAAGGGTGTGATCCAGTTAACAAGCTTTACTACTGTGACTTGTCTGAACTTCCCAGTGGACTGGAAGGTTTTCGGAATGAAAACTCCCTCCTCCCATTTGTCAAGCTTATTGATAAATTTGATGCACAGTATCATGCTGTTGCAAATGATGACACCGTGTTTACATTTTTAACCAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAAGAACCAAATGCTTGGACTGATGTTATCCAAGAGTCTGAAAAAGATGTGCTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATTGTGAGGTACTTGAGTGATGTGAAGTATGTTGTGCAAGTAAGGGACTTAGAAACAGGTTCATTGCAGCATCAATTACCAATTGACATTGGCACAGTTTATGGAATTTCTGCACGGCGTGAAGATACTGTGGTTTTCATTGGCTTTACAAGTTTTTTGACTCCTGGTATCATATATCTGTGCGACCTGGGAACACAGATTCCTGATATGAAGATATTTCGAGAAATTGTGGTCCCTGGATTTGATCGCTCTGGCTTTCATGTCAATCAGGTTTTTGCGCCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAGAAAGGATATTATATTGGATGGTTCACACCCTTGTTTGTTATATGCATATGGTGGTTTTAACATCAATCTTACACCATATTTCAGCGTCAGTCGCATTGTACTTACAAGACATTTAGGTGCTGTTTTCTGCATAGCAAATATTCGTGGAGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCTCTTGCAAAAAAGCAAAACTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCTGGTTATACTCAACCCAGAAAGTTATGCATAGAAGGTGGAAGCAATGGTGGGCTTCTTGTTGGTGCTTGCATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCACGCTTGGACCTCAGATTATGGTTGTTCAGACAAGGAGGAAGAATTTCATTGGCTAATCAAGTACTCACCATTGCACAATGTCCGTAGACCTTGGGAACAGCATCCTGATAAGTCAATTCAGTACCCATCAACAATGTTGTTGACGGCTGATCATGATGATCGTGTTGTGCCCTTGCATTCTTTGAAGCTATTGGCGTATGTCCTCAGTACTAGCCTAGATAAAAGTCCCCAGACGAACCCTATAATTGGTCGCATTGAATGCAAAGCTGGACATGGTGCCGGGCGTCCGACACAGAAAATGATTGATGAAGCTGCTGACCGGTACGGTTTTATGGCTAAGATGTTAGACGCCCATTGGATTGAATAG 2187 0.4262 MGSLSAFDQPIQYPNARRDDSVVDDFHGVKIPDPYRWLENPDAEEVKEFVQEQVRLTDSVLQKCDIRGKLRETITKLFDHPRYEVPFRRGNKYFYFHNTGLQPQSVLYVQDSLEGEAEVLLDPNALSEDGTVSLNTLSVSKDAKFLAYGLSSSGSDWVTIKVMCVEDKNVEPDTLSWVKFSSISWTHDSKGFFYSRYPAPRDGDVVDAGTETNANLRHELYYHFLGTDQSEDILCWRDPDNPKYLFGGSVTNDGKYVLLYIDEGCDPVNKLYYCDLSELPSGLEGFRNENSLLPFVKLIDKFDAQYHAVANDDTVFTFLTNKDAPKYKLVRVDLKEPNAWTDVIQESEKDVLESACAVNGNQLIVRYLSDVKYVVQVRDLETGSLQHQLPIDIGTVYGISARREDTVVFIGFTSFLTPGIIYLCDLGTQIPDMKIFREIVVPGFDRSGFHVNQVFAPSKDGTKIPMFIVARKDIILDGSHPCLLYAYGGFNINLTPYFSVSRIVLTRHLGAVFCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSAGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHPDKSIQYPSTMLLTADHDDRVVPLHSLKLLAYVLSTSLDKSPQTNPIIGRIECKAGHGAGRPTQKMIDEAADRYGFMAKMLDAHWIE 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1506g00013 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Gabi1506g00013 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Gabi1506g00013 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Gabi1506g00013 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Gabi1506g00013 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Gabi1506g00013 728 FunFam Prolyl endopeptidase 81 440 - -
Gabi1506g00013 728 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 428 IPR023302 GO:0004252
Gabi1506g00013 728 Gene3D alpha/beta hydrolase 22 718 IPR029058 -
Gabi1506g00013 728 SUPERFAMILY alpha/beta-Hydrolases 451 701 IPR029058 -
Gabi1506g00013 728 Gene3D - 81 440 - -
Gabi1506g00013 728 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Gabi1506g00013 728 PANTHER PROLYL ENDOPEPTIDASE 5 726 - -
Gabi1506g00013 728 FunFam Prolyl endopeptidase 405 718 - -
Gabi1506g00013 728 Pfam Prolyl oligopeptidase family 496 723 IPR001375 GO:0006508|GO:0008236
Gabi1506g00013 728 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1506g00013 Gabi-Chr1506 203783 209545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1506g00013 481 613 Carbohydrate Esterase AT5G36210 30.496 5.65e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1506g00013 K01322 - gmx:100812955 1359.36