Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1504g00005 ATGGCCTCACCACCTAGTGGAAACTCCTTCACATCCACTACTATGTCTGGCTCTGAGGAAAATTTGCAGCTTCTGATGGATCAAAGGAAAAGGAAGAGAAAGGAATCGAATCGTGAATCAGCAAAAAGATCTCGGATGCGAAAGCAGAAGCACTTTGATGATCTCAATACCCAAGTGGACCTGCTCAGAAAGGAAAACAGTGAAATCCTCACAAGTGTTAACATCACCACCCAGCACTGTATTGGGGTTGAGGCAGAGAATTGCATTCTGAGGACCCAAATGGCTGAACTTAGCCAAAGGTTACAATCACTTAATGATATCATCAACCTCATCAAAACCACAACAACAACAACCACTGCTGGGTTCTCCGGAATGGATTGTTATCCAACAAGTGCTGATAATTTCATGAACCCCATGAACATGCTCTACCTTAACCAACCAATTATGGCATCTGCTGACATGTTTCAGTGGTGA 474 0.4346 MASPPSGNSFTSTTMSGSEENLQLLMDQRKRKRKESNRESAKRSRMRKQKHFDDLNTQVDLLRKENSEILTSVNITTQHCIGVEAENCILRTQMAELSQRLQSLNDIINLIKTTTTTTTAGFSGMDCYPTSADNFMNPMNMLYLNQPIMASADMFQW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1504g00005 157 Gene3D - 27 81 - -
Gabi1504g00005 157 MobiDBLite consensus disorder prediction 1 52 - -
Gabi1504g00005 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 27 74 IPR004827 GO:0003700|GO:0006355
Gabi1504g00005 157 MobiDBLite consensus disorder prediction 24 52 - -
Gabi1504g00005 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 12 153 - -
Gabi1504g00005 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
Gabi1504g00005 157 CDD bZIP_plant_GBF1 30 80 IPR045314 GO:0003700|GO:0006355
Gabi1504g00005 157 SMART brlzneu 25 89 IPR004827 GO:0003700|GO:0006355
Gabi1504g00005 157 Coils Coil 15 35 - -
Gabi1504g00005 157 FunFam BZIP transcription factor 27 78 - -
Gabi1504g00005 157 Coils Coil 94 114 - -
Gabi1504g00005 157 Pfam bZIP transcription factor 29 74 IPR004827 GO:0003700|GO:0006355
Gabi1504g00005 157 MobiDBLite consensus disorder prediction 1 23 - -
Gabi1504g00005 157 SUPERFAMILY Leucine zipper domain 29 80 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1504g00005 Gabi-Chr1504 116485 117964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1504g00005 25 157 bZIP Transcription Factor Family AT4G34590 53.191 1.28e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1504g00005 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1504g00005 K25786 - rcu:8275772 172.94