Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1504g00003 ATGTCAAAATCTGTGGAACTCCCAGATTGTTTCTATCCTAGGCAACCAATTACCATAACCCCAAGTGCTCCAACGCCAAAGCATTCTCTCTATCTCTCTAATTTCGACAACCAAAACTTGCTCAGATTCTCCATTAAGTACTTGTACCTCTTCAAGAAATCTGTTAACTTTGATACCTTGAAGTCTTCTCTGTCCAGAGTTCTAGTGGATTACTACCCATTAGCTGGGAGATTGAGAACCTGCATTGAGGATGATCACAGGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTGTTTGCTGAGGCTTTCATAGATACCACTGTTGAAGAATTGCTTGAACCTTCCAAGTTTCCAAACGAGTCATGGAGGAAGTTTTTGTATAAGGTGGAAGCTCAAAGTTTCTTAGATGTTCCTCCTCTTGTAGTCCAGGCGACGAGGCTTCGTTGCGGAGGAATGATCCTATGTACCGCGATCCACCACTGCCTATGCGACGGCATCGGCACGTCACAGTTTTTAAACGCTTGGGCCAAACTTACCAAAGACGTCAAAACCGATTTGACAATCATACCCTTCCACGAGAGACACGTGTTAAAACCTCGAGATCCCCCGCAGGTAAAGTTCCCTCACCCGGGAAACACCAGAACAAAACCCACTCCTCAAGTTGACCTATTCAAGTTTGTTCAGTCGCAGCCACTGGTCGCCACGTCATTCACCTTCGGACCCTCCGAAGTGCTTCGCTTGAAGAAGCAGTGCGTGCCGTCAACGACACTAAACAGAATCACAACCTTTGAAGCGGTGGCGGCACACACGTGGCGGTCATGGGTTCGATCACTGAACCTGTGCCCCACCCTCGTGGTGAAGCTCCTTTTCTCCGTTAACGTTCGGAAAAAGATGAAACTCCCAGAAGGGTATTATGGGAATGGGTTCGTTATAGGGTGTGCTGAGAGCACGGTGAAGGATTTGTTAGCTGCTAATAACCTGCATCATGGTTTGAAACAGGTGCAAGAAGCTAAGGCTAGTTTGGATGATGATGAGTATATAAGGTCCATGATTGATTTGTTAGAGGACAAGATGGTGAGAACAGATCTTTCTAGAAGCTTGGTTATATCACAGTGGTCTAGGTTAGGGTTGGAAGATGTGGATTTTGGAGAAGGGAAGCCATTGCATATGGGTCCTTTAACAAGTGGTGTTTATTGCTTGCTTTTACCTGTTGTTGGAGATGCTAATGCTGTGAGAGTGCTTGTGTCGGTTCCCGAGAGTGTGGTAGAAAGTTTTAAGTGTCACATGATGATGATGATGATGATGATGATGAAGAAAGAAAGTTGGGAAAATGATGAAAATGGTGATGTTAACACAAATGGGTATCATGCGCAAGAAAATGGATTATTTTGA 1392 0.4511 MSKSVELPDCFYPRQPITITPSAPTPKHSLYLSNFDNQNLLRFSIKYLYLFKKSVNFDTLKSSLSRVLVDYYPLAGRLRTCIEDDHRLEVDCNGEGAVFAEAFIDTTVEELLEPSKFPNESWRKFLYKVEAQSFLDVPPLVVQATRLRCGGMILCTAIHHCLCDGIGTSQFLNAWAKLTKDVKTDLTIIPFHERHVLKPRDPPQVKFPHPGNTRTKPTPQVDLFKFVQSQPLVATSFTFGPSEVLRLKKQCVPSTTLNRITTFEAVAAHTWRSWVRSLNLCPTLVVKLLFSVNVRKKMKLPEGYYGNGFVIGCAESTVKDLLAANNLHHGLKQVQEAKASLDDDEYIRSMIDLLEDKMVRTDLSRSLVISQWSRLGLEDVDFGEGKPLHMGPLTSGVYCLLLPVVGDANAVRVLVSVPESVVESFKCHMMMMMMMMMKKESWENDENGDVNTNGYHAQENGLF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1504g00003 463 Gene3D - 14 212 IPR023213 -
Gabi1504g00003 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 420 - -
Gabi1504g00003 463 SUPERFAMILY CoA-dependent acyltransferases 28 182 - -
Gabi1504g00003 463 Gene3D - 219 430 IPR023213 -
Gabi1504g00003 463 Pfam Transferase family 18 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1504g00003 Gabi-Chr1504 67059 69834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1504g00003 14 392 Monolignol Biosynthesis Gene Families AT5G48930 30.198 1.82e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1504g00003 - - aip:107645267 665.225