Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1503g00015 ATGCCGGAGGAAACGACGTCGATTGACTACGTGATGGAGGCAGCGTCTGGGCCCCACTTCTCGGGTCTGCGACTGGACGGCCGTAAACCAACATCGTCAACCTCATCTCCCGCTCCTGATTCATCCCTAACCACCGATTCCCTTCCCAATCAACCCTTCGTCATAGGAGTTTCTGGTGGTACTGCCTCAGGGAAGACCACCGTGTGCGACATGATCATTCAGCAGCTTCACGATCACCGCGTCGTCCTCGTCAATCAGGATTCGTTTTATCGTGGTTTGAGACCGGAAGAAATGGAACGCGTGCACGAGTACAATTTCGATCACCCTGATGCTTTTGACACTGAACAGATGTTAGAGTGCATGAGGAAGCTCATCAGTGGCCAGTGTGTGCAAGTCCCCATTTATGACTTTAAGAAACACCAACGTTGGATTCTGCCAAGGAGAGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAAGATGTCCGTGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGGAGAATTAGACGTGACACAGTGGAAAGGGGCAGAGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTGCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAATCAACGTTCCAGATAAGGGGCATGCATACATTGATTCGTGACCGAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTTATACGCCTGGTTGTCGAGCATGGTCTAGGTCATCTGCCATTCACTGAAATGCAAGTGGTTACTCCGACAGGATCTTTGTATACTGGTGTTGATTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTTATTCATCGGGATGGAGACAATGGAAAACAGCTTATTTATGAGAAGCTTCCCAAGGATATTTCAGAAAGGCATGTCTTGCTTCTTGACCCTGTCCTTGCTACAGGTAACTCTGCCAACCAGGCAATTGAATTACTCATTCAGAAAGGAGTTCCAGAATCCCACATTATATTCCTGAATCTCATTTCCGCTCCCGAGGGAATCCATTGTGTATGTAAAAGGTTTCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCCTTAAATGAAGAGTTTCGTGTTATCCCGGGATTGGGCGAGTTTGGTGATCGCTACTTTGGTACTGATGATTGA 1419 0.4397 MPEETTSIDYVMEAASGPHFSGLRLDGRKPTSSTSSPAPDSSLTTDSLPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEEMERVHEYNFDHPDAFDTEQMLECMRKLISGQCVQVPIYDFKKHQRWILPRRVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEMQVVTPTGSLYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1503g00015 472 Pfam Uracil phosphoribosyltransferase 269 470 - -
Gabi1503g00015 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 244 IPR027417 -
Gabi1503g00015 472 CDD PRTases_typeI 328 443 IPR000836 -
Gabi1503g00015 472 CDD UMPK 54 251 IPR000764 -
Gabi1503g00015 472 Pfam Phosphoribulokinase / Uridine kinase family 54 239 IPR006083 GO:0005524|GO:0016301
Gabi1503g00015 472 PRINTS Uridine kinase signature 197 208 - -
Gabi1503g00015 472 PRINTS Uridine kinase signature 52 69 - -
Gabi1503g00015 472 PRINTS Uridine kinase signature 127 142 - -
Gabi1503g00015 472 PRINTS Uridine kinase signature 219 232 - -
Gabi1503g00015 472 PRINTS Uridine kinase signature 183 193 - -
Gabi1503g00015 472 PRINTS Uridine kinase signature 82 93 - -
Gabi1503g00015 472 SUPERFAMILY PRTase-like 254 471 IPR029057 -
Gabi1503g00015 472 Gene3D - 49 254 IPR027417 -
Gabi1503g00015 472 FunFam Uridine kinase 255 470 - -
Gabi1503g00015 472 MobiDBLite consensus disorder prediction 19 50 - -
Gabi1503g00015 472 MobiDBLite consensus disorder prediction 27 50 - -
Gabi1503g00015 472 NCBIfam uridine kinase 52 251 IPR000764 -
Gabi1503g00015 472 Gene3D - 255 470 IPR029057 -
Gabi1503g00015 472 PANTHER URIDINE KINASE 37 381 - -
Gabi1503g00015 472 FunFam Uridine kinase 49 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1503g00015 Gabi-Chr1503 208364 216055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1503g00015 1 472 PRT Gene Family AT5G40870 83.644 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1503g00015 K00876 - gmx:100780005 875.159