Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1503g00014 ATGCCGGAGGAAACGACGTCGATTGACTACGTGATGGAGGCAGCGTCTGGGCCCCACTTCTCGGGTCTGCGACTGGACGGCCGTAAACCAACATCGTCAACCTCATCTCCCGCTCCTGATTCATCCCTAACCACCGATTCCCTTCCCAATCAACCCTTCGTCATAGGAGTTTCTGGTGGTACTGCCTCAGGGAAGACCACCGTGTGCGACATGATCATTCAGCAGCTTCACGATCACCGCGTCGTCCTCGTCAATCAGGATTCGTTTTATCGTGGTTTGAGACCGGAAGAAATGGAACGCGTGCACGAGTACAATTTCGATCACCCTGATGCTTTTGACACTGAACAGATGTTAGAGTGCATGAGGAAGCTCATCAGTGGCCAGTGTGTGCAAGTCCCCATTTATGACTTTAAGAAACACCAACGGTCTTCCGATAGTTTTAGACAGGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAAGATGTCCGTGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGGAGAATTAGACGTGACACAGTGGAAAGGGGCAGAGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTGCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAATCAACGTTCCAGATAAGGGGCATGCATACATTGATTCGTGACCGAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTTATACGCCTGGTTGTCGAGCATGGTCTAGGTCATCTGCCATTCACTGAAATGCAAGTGGTTACTCCGACAGGATCTTTGTATACTGGTGTTGATTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTTATTCATCGGGATGGAGACAATGGAAAACAGCTTCCCAAGGATATTTCAGAAAGGCATGTCTTGCTTCTTGACCCTGTCCTTGCTACAGGTAACTCTGCCAACCAGGCAATTGAATTACTCATTCAGAAAGGAGTTCCAGAATCCCACATTATATTCCTGAATCTCATTTCCGCTCCCGAGGGAATCCATTGTGTATGTAAAAGGTTTCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCCTTAAATGAAGAGTTTCGTGTTATCCCGGGATTGGGCGAGTTTGGTGATCGCTACTTTGGTACTGATGATTGA 1407 0.4407 MPEETTSIDYVMEAASGPHFSGLRLDGRKPTSSTSSPAPDSSLTTDSLPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEEMERVHEYNFDHPDAFDTEQMLECMRKLISGQCVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEMQVVTPTGSLYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1503g00014 468 Gene3D - 256 466 IPR029057 -
Gabi1503g00014 468 FunFam Uridine kinase 256 466 - -
Gabi1503g00014 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 245 IPR027417 -
Gabi1503g00014 468 CDD UMPK 54 252 IPR000764 -
Gabi1503g00014 468 Pfam Phosphoribulokinase / Uridine kinase family 54 240 IPR006083 GO:0005524|GO:0016301
Gabi1503g00014 468 NCBIfam uridine kinase 52 252 IPR000764 -
Gabi1503g00014 468 MobiDBLite consensus disorder prediction 19 50 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 52 69 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 127 142 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 220 233 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 184 194 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 198 209 - -
Gabi1503g00014 468 PRINTS Uridine kinase signature 82 93 - -
Gabi1503g00014 468 MobiDBLite consensus disorder prediction 27 50 - -
Gabi1503g00014 468 Pfam Uracil phosphoribosyltransferase 270 466 - -
Gabi1503g00014 468 FunFam Uridine kinase 49 255 - -
Gabi1503g00014 468 CDD PRTases_typeI 329 439 IPR000836 -
Gabi1503g00014 468 Gene3D - 49 255 IPR027417 -
Gabi1503g00014 468 PANTHER URIDINE KINASE 37 377 - -
Gabi1503g00014 468 SUPERFAMILY PRTase-like 255 467 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1503g00014 Gabi-Chr1503 208363 216055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1503g00014 1 468 PRT Gene Family AT5G40870 83.437 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1503g00014 K00876 - gmx:100780005 878.626