Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1500g00011 ATGTCTAAACTCTTTAATTCATCAGCTATGGGACCGTTTAAAGGAATAATTCAAGATGTCAAAGGAAGAGCTGAATGCTATAAGCAAGATTGGGATAGTGCAATCCGTTGTGGCGTTAGGATATTGGCTCCAACTTTCTACATATTCTTCGCTTCTGCTCTCCCTGTCATTGCTTTTGGAGAGCAACTTAAGGAGGTTACAGGTGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTTCTATTTGTGGAATTATCCACTCAATATTTGGTGGCCAGCCTTTGTTAATTGTAGGAGTTGCGGAACCCACTGTCATAATGTACCATATTCTGTTCGATTTCTGCAAAAAAAGGCCTGAACTTGGGGCCAAGCTTTTTCTTCCTTGGGCTGGTTGGGTTTGTGTCTGGACATCACTCTTGCTAATACTACTTGCAATTTTTAACGCGTGCACAGTTATCAGTAGGTTCACAAGAATTGCTGAGGAATTATTTGGCATGTTGATCACTGTCCTTTTTTTTCAACAGGCAATAGAGGGACTCATAAGCGAGTTCGGTGTAACCAAGACTGAAAATCCATTGTCAGAGGAATCTCAATTTCATTGGCAGTATACTAATGGATTACTTGCAATCATTTTCTCTTTTGGGGTGCTTTTCACTGCCATTAAAAGCAGAAGAGCAAGATCATGGCATTATGGAACAGGGTGGCTACGAGGTTTCATTGCAGATTATGGGGTCCCAATGATGGTAGTGTTTTGGACTGCACTATCTTATACTGTACCAGGCAAAGTTCCATCTGGTGTTCCTAAAAGGCTGCTTTGCCCACTTCCCTGGGAACCTGCGTCTCTCTACCACTGGACAGTAGTGAAGGATATGGGGAAGGTACCTTTGGTTTATATCTTTGGGGCATTTATTCCAGCTGTGATGATAGCAGGTTTATACTTTTTTGATCACAGTGTAGCTTCAAAGATGGCTCAACAGAAGGAATATAACCTTCAAAAACCATCTGCCTACCACTATGATATTTTCCTGCTTGGAATAATGACTCTGATTTGCGGTATTCTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCTCCCATGCATACGAAGAGTTTAGCAGTTCTCAGGAGGCAGTTGATCCGAAAGAAGGTGGTAAAAAGTGCCAAGGAATGCATTAAGCAACAAGGGAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGTTTATAGAAATGGATACAGCACCTACTGATAAAGAGTTGGAGAATTTGAAGGAGGCTGTAATGAAATCTGATGTAAAAGATGGTGCAAAGGAAAATTTTGATCCAGATAAACACATAGATGCATATCTACCTGTCCGGGTTAATGAGCAAAGAATGAGCAACTTATTGCAATCTCTCCTAGTTGGTCTATCTCTTTTAGCAGTCCCTGTCATCAAAAGGATACCTACCTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGGAATCAATTTTGGGAAAGGATATCGCTTCTCTTCATCACCCCAAGCCGGCTCTACAAAATTTTGGAAGGTTCTCATGCCTCATTCGTGGAGTCAGTACCATTCAAGACCATAGCTGCATTTACACTCATACAGTTTGTATATTTTGTGATCTGTTACGGATTGACATGGATACCTATTGGAGGAATATTGTTTCCACTACCTTTCTTCCTTCTCATAACAATAAGAGAACATTTGCTTCCAAAGCTATTCAAGCCTAACCATCTTCAGGAACTAGATGCTGCTGGGTACGAGGAAATTGTTGGTAATGCACATGCTACCCATAATATGAGGGATAAGGAGCCACATGATACTGACAGTGATGACAGATCAGAAGATTATTATGATGCAGAGATATTGGATGAGATGACAACCCACAGGGGAGAATTGAAACTTAGAACTGTAAGCCAAAATAGTAGAAGCTTAAGCAACCGCAGCTTCAGCTACAGCTTCAGTGAAGACAGGCAGTTTCAGGTTTACCCTGAAGAAGCTATGAGGATATGA 2046 0.414 MSKLFNSSAMGPFKGIIQDVKGRAECYKQDWDSAIRCGVRILAPTFYIFFASALPVIAFGEQLKEVTGGSLSTVETLASTSICGIIHSIFGGQPLLIVGVAEPTVIMYHILFDFCKKRPELGAKLFLPWAGWVCVWTSLLLILLAIFNACTVISRFTRIAEELFGMLITVLFFQQAIEGLISEFGVTKTENPLSEESQFHWQYTNGLLAIIFSFGVLFTAIKSRRARSWHYGTGWLRGFIADYGVPMMVVFWTALSYTVPGKVPSGVPKRLLCPLPWEPASLYHWTVVKDMGKVPLVYIFGAFIPAVMIAGLYFFDHSVASKMAQQKEYNLQKPSAYHYDIFLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRQLIRKKVVKSAKECIKQQGSNSELYGKMQAVFIEMDTAPTDKELENLKEAVMKSDVKDGAKENFDPDKHIDAYLPVRVNEQRMSNLLQSLLVGLSLLAVPVIKRIPTSVLWGYFAYMAIDSLPGNQFWERISLLFITPSRLYKILEGSHASFVESVPFKTIAAFTLIQFVYFVICYGLTWIPIGGILFPLPFFLLITIREHLLPKLFKPNHLQELDAAGYEEIVGNAHATHNMRDKEPHDTDSDDRSEDYYDAEILDEMTTHRGELKLRTVSQNSRSLSNRSFSYSFSEDRQFQVYPEEAMRI 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1500g00011 681 PANTHER ANION EXCHANGE PROTEIN 10 602 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gabi1500g00011 681 Gene3D Helical hairpin bin 23 65 - -
Gabi1500g00011 681 Pfam HCO3- transporter family 12 189 IPR011531 GO:0006820|GO:0016020
Gabi1500g00011 681 Pfam HCO3- transporter family 454 545 IPR011531 GO:0006820|GO:0016020
Gabi1500g00011 681 Pfam HCO3- transporter family 195 378 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1500g00011 Gabi-Chr1500 91724 96785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1500g00011 11 650 Antiporters AT5G25430 69.492 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1500g00011 K24194 - gmx:100808880 1066.6